NDLI: Evolutionary analysis of rubella viruses in mainland China during 2010–2012: endemic circulation of genotype 1E and introductions of genotype 2B

Content Provider	PubMed Central
Author	Zhu, Zhen Pierre, Rivailler Abernathy, Emily Cui, Aili Zhang, Yan Mao, Naiyin Xu, Songtao Zhou, Shujie Lei, Yue Wang, Yan Zheng, Huanying He, Jilan Chen, Ying Li, Chongshan Bo, Fang Zhao, Chunfang Chen, Meng Lu, Peishan Li, Fangcai Gu, Suyi Gao, Hui Guo, Yu Chen, Hui Feng, Daxing Wang, Shuang Tang, Xiaomin Lei, Yake Feng, Yan Deng, Lili Gong, Tian Fan, Lixia Xu, Wenbo Icenogle, Joseph Chen, Xia Tian, Hong Ma, Yan Liu, Leng Liu, Li Liu, Jianfeng Fu, Hong Yang, Yuying Ma, Yujie Zhao, Hua Huang, Fang Hu, Ying Zhang, Hong Tian, Xiaoling Du, Hui Ma, Xuemin Zhang, Zhenying Xu, Jin Zhou, Jianhui Ye, Xufang Li, Jing Lu, Yiyu Liu, Wei Zhang, Yanni Zhao, Shengcang Ba, Zhuoma
Copyright Year	2015
Abstract	Rubella remains a significant burden in mainland China. In this report, 667 viruses collected in 24 of 31 provinces of mainland China during 2010–2012 were sequenced and analyzed, significantly extending previous reports on limited numbers of viruses collected before 2010. Only viruses of genotypes 1E and 2B were found. Genotype 1E viruses were found in all 24 provinces. Genotype 1E viruses were likely introduced into mainland China around 1997 and endemic transmission of primarily one lineage became established. Viruses reported here from 2010–2012 are largely in a single cluster within this lineage. Genotype 2B viruses were rarely detected in China prior to 2010. This report documents a previously undetected 2B lineage, which likely became endemic in eastern provinces of China between 2010 and 2012. Bayesian analyses were performed to estimate the evolutionary rates and dates of appearance of the genotype 1E and 2B viral linages in China. A skyline plot of viral population diversity did not provide evidence of reduction of diversity as a result of vaccination, but should be useful as a baseline for such reductions as vaccination programs for rubella become widespread in mainland China.
Related Links	http://dx.doi.org/10.1038/srep07999
Starting Page	7999
File Format	PDF
ISSN	20452322
e-ISSN	20452322
Journal	Scientific Reports
Volume Number	5
Language	English
Publisher	Nature Publishing Group
Publisher Date	2015-01-01
Access Restriction	Open
Rights Holder	Nature Publishing Group
Subject Keyword	Science and technology Research in Higher Education
Content Type	Text
Resource Type	Article
Subject	Multidisciplinary

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