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| Content Provider | World Health Organization (WHO)-Global Index Medicus |
|---|---|
| Author | Rafiq, Rumaisa Bhat, Gulzar Ahmad Lone, Mohd Maqbool Masood, Akbar Dar, Nazir Ahmad |
| Description | Author Affiliation: Rafiq R ( Department of Biochemistry, University of Kashmir, Srinagar, Jammu and Kashmir, India, 190006.); Bhat GA ( Department of Biochemistry, University of Kashmir, Srinagar, Jammu and Kashmir, India, 190006.); Lone MM ( Department of Radiation Oncology, SK Institute of Medical Sciences, Srinagar, Jammu and Kashmir, India, 190011.); Masood A ( Department of Biochemistry, University of Kashmir, Srinagar, Jammu and Kashmir, India, 190006.); Dar NA ( Department of Biochemistry, University of Kashmir, Srinagar, Jammu and Kashmir, India, 190006. nazirramzan@uok.edu.in.) |
| Abstract | The association of nucleotide excision repair (NER) gene polymorphisms with esophageal squamous cell carcinoma (ESCC) is inconclusive. The aim of the current study was to assess the association of repair gene xeroderma pigmentosum A (XPA) (rs-1800975) and xeroderma pigmentosum C (XPC) (rs-2228000) polymorphisms with ESCC risk as well as modifying effects of environmental factors. The genotyping was done in 450 confirmed ESCC cases and equal number of individually matched controls by the polymerase chain reaction and restriction fragment length polymorphism (PCR-RFLP) and direct sequencing methods. Conditional logistic regression models were used to assess the genotypic associations and interactions. A high ESCC risk was found in subjects who carried the homozygous minor allele of XPA (odds ratio (OR) = 3.57; 95 % confidence interval (CI) = 1.76-7.23), and the risk was higher when analysis was limited to participants who were ever smokers (OR = 4.22; 95 % CI = 2.01-8.88), lived in adobe houses (OR = 8.42; 95 % CI = 3.74-18.95), consumed large volumes of salt tea (OR = 7.42; 95 % CI = 3.30-16.69), or had a positive family history of cancer (FHC) (OR = 9.47; 95 % CI = 4.67-19.20). In case of XPC, a homozygous minor allele also showed strong association with ESCC risk (OR = 4.43; 95 % CI = 2.41-8.16). We again observed a very strong effect of the above environmental factors in elevating the risk of ESCC. Further, the variant genotypes of both genes in combination showed an increased risk towards ESCC (OR = 7.01; 95 % CI = 3.14-15.64) and such association was synergistically significant. Salt tea consumption showed an interaction with genotypes of XPA and XPC. However, an interaction with FHC was significant in the case of XPA genotype only. XPA and XPC genotypes are associated with an increased risk of ESCC, and such association was reasonably modulated by different exposures. |
| File Format | HTM / HTML |
| ISSN | 10104283 |
| Issue Number | 8 |
| Journal | Tumor Biology |
| Volume Number | 37 |
| e-ISSN | 14230380 |
| Language | English |
| Publisher | Springer |
| Publisher Date | 2016-08-01 |
| Publisher Place | Netherlands |
| Access Restriction | Subscribed |
| Content Type | Text |
| Resource Type | Article |
| Subject | Medicine Cancer Research |
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