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| Content Provider | IEEE Xplore Digital Library |
|---|---|
| Author | Blanco, R. de Miguel Casado, G. Requeno, J.I. Colom, J.M. |
| Copyright Year | 2010 |
| Description | Author affiliation: Department of Computer Science and Systems Engineering (DIIS), Aragon Institute of Engineering Research (I3A), Universidad de Zaragoza, Spain (Blanco, R.; de Miguel Casado, G.; Requeno, J.I.; Colom, J.M.) |
| Abstract | The need for general-purpose algorithms for the study of biological properties in phylogenetics motivates the research in formal verification frameworks so that researchers can focus their efforts exclusively on evolution modelling and property specification. To this end, model checking, a mature automated verification technique from computer science, is proposed for phylogenetic analysis. Three cornerstones found our approach: modelling evolution dynamics with transition systems; specifying phylogenetic properties using temporal logic formulae; and verifying the latter by means of automated computer tools. As prominent advantages stemming of studying phylogenetic properties with this approach, different models of evolution can be considered, complex properties can be specified as the logical composition of others, and the refinement of unfulfilled properties as well as the discovery of new ones can be undertaken by exploiting the verification results. |
| Starting Page | 152 |
| Ending Page | 157 |
| File Size | 383284 |
| Page Count | 6 |
| File Format | |
| ISBN | 9781424483037 |
| e-ISBN | 9781424483044 |
| DOI | 10.1109/BIBMW.2010.5703790 |
| Language | English |
| Publisher | Institute of Electrical and Electronics Engineers, Inc. (IEEE) |
| Publisher Date | 2010-12-18 |
| Publisher Place | China |
| Access Restriction | Subscribed |
| Rights Holder | Institute of Electrical and Electronics Engineers, Inc. (IEEE) |
| Subject Keyword | phylogenetic analysis model checking formal verification temporal logic Biology |
| Content Type | Text |
| Resource Type | Article |
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