NDLI: Automatic Gridding of Rotated Microarray Images

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2009 International Conference on Biomedical and Pharmaceutical Engineering

2006 International Conference on Biomedical and Pharmaceutical Engineering

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Automatic Gridding of Rotated Microarray Images

Content Provider	IEEE Xplore Digital Library
Author	Le Brese, C. Ju Jia Zou
Copyright Year	2006
Description	Author affiliation: Univ. of Western Sydney, Sydney (Le Brese, C.; Ju Jia Zou)
Abstract	This paper presents a new method for automatically gridding rotated microarray images. In previous methods rotation of an image is either ignored or a high amount of user intervention is required to correct the problem. Automation of this process is essential. The proposed method uses the Hough Transform to find the current orientation of the image. Once the orientation is found the microarray can be automatically rotated to allow gridding to be performed. The proposed method works independent of spot colour, size and location, thus the number of user parameters is kept at a minimum. Most notably the program performed rotations on microarrays with a rotation of 0.6 degrees. The proposed method can allow processing of images scanned in any orientation and as a result greater throughput can be achieved.
Starting Page	34
Ending Page	38
File Size	533619
Page Count	5
File Format	PDF
ISBN	9789810579
Language	English
Publisher	Institute of Electrical and Electronics Engineers, Inc. (IEEE)
Publisher Date	2006-12-11
Publisher Place	Singapore
Access Restriction	Subscribed
Rights Holder	NTU
Subject Keyword	Image segmentation Automation DNA Glass Fluorescence Position measurement Quantization Throughput Australia Robots
Content Type	Text
Resource Type	Article

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