NDLI: MeaBench: A toolset for multi-electrode data acquisition and on-line analysis

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Conference Proceedings. 2nd International IEEE EMBS Conference on Neural Engineering, 2005.

Engineering in medicine and biology society

Table of contents

Implantable Biomimetic Electronics as a Neural Prosthesis for Lost Memory Function

Magnetic Resonance Based Ventricle System Classification by Multi-Species Genetic Algorithm

MRI Template and Atlas Toolbox for the C57BL/6J Mouse Brain

Multislice Brain Mapping and Quantification of Perfusion MRI Data

A Projection Approach of Optical Topographic Maps to the Cortical Surface of the Brain Abstract:

Cerebral Hemodynamics Assessed by means of Transcranial Doppler and Near - Infrared Spectroscopy in Healthy Smokers and non-Smokers

Significance tests for MEG response detection

Topographic and energy analysis of resting MEG and photic stimulation responses in control subjects and patients with schizophrenia

MEG Adaptive Noise Suppression using Fast LMS

MEG Responses to Speech and Stimuli With Speechlike Modulations

An Algorithm of Nonlinear Interpolation Segmentation Based on Distance Mask Applied to Human Brain 3D Reconstruction

A Self-adaptive Brain Image Enhancement Algorithm Based on Wavelet Transform

An Abnormal EEG Simulation Based on The Chay Model of An Excitable Neuron

Functional Changes in Sensorimotor Regions of the Brain Following Spinal Injury

Recursive Segmentation of Minicolums Using Myelinated Bundles

Processing of foot pressure images and display of an advanced clinical parameter PR in Diabetic Neuropathy

Large-Scale Neural Interface Technology: Directly Connecting the Brain To the Real World

Engineering New Approaches to Rehabilitation

A Systems Approach for Real-Time Data Compression in Advanced Brain-Machine Interfaces

Neural-Ensemble Activity of Spinal Cord L1/L2 During Stepping in a Decerebrate Rat Preparation

High Frequency Stimulation Suppresses Compound Action Potentials In Vitro

Predicting reach goal in a continuous workspace for command of a brain-controlled upper-limb neuroprosthesis

Variable Selection for Motor Cortical Control of Directions

Encoding of Tactile Responses in the Periphery of the Somatosensory System

Tracking of the Mu Rhythm using an Empirically Derived Matched Filter

Reversal Phenomenon in a Simple Motor Task: Evidence for an Indirect Model

Enhancement of Performance of an EEG-based Brain-Computer Interface by means of a Time-Frequency Approach

A Boosting Approach to P300 Detection with Application to Brain-Computer Interfaces

A New Design of the Asynchronous Brain Computer Interface Using the Knowledge of the Path of Features

Propagation of Brain Electrical Activity During Real and Imagined Motor Task by Directed Transfer Function

A New Experimental Framework for the Examination of Acute Dysfunction in Traumatic Neural Injury

A Portable Wireless DSP System for a Brain Machine Interface

A Tri-State FSK Demodulator for Asynchronous Timing of High-Rate Stimulation Pulses in Wireless Implantable Microstimulators

Architectures of laboratory-PC and mobile pocket PC brain-computer interfaces

A New Model and Improved Cable Function for representing The Activating Peripheral Nerves by a Transverse Electric Field during Magnetic Stimulation

EEG Source Localization for Brain-Computer-Interfaces

Localizing Synchronized Dipole Sources Using a Modified RAP-MUSIC Algorithm

Preliminary analysis of multi-channel recordings for the development of a high-level Cortical Neural Prosthesis

Cross-validated classification of Intracranial Sources extracted by BET-ART method

Field Programmable Gate Array Implementation of Neuronal Ion Channel Dynamics

Cortical recording with silicon microelectrodes: model-based analysis of contact dimension and encapsulation changes on recorded waveforms

A Fully-Automated Neural Spike Sorting Based on Projection Pursuit and Gaussian Mixture Model

Complexity-based Analysis of the Dynamic of Propagation of Epileptic Seizures

Design Proposal for a Chip Jointing VLSI and Rat Spinal Cord Neurons on a Single Silicon Wafer

Low-Power Architectures for Spike Sorting

Useful Signals From Motor Cortex

Optimal Input Selection for MISO Systems Identification: Applications to BMIs

Neuromorphic algorithm for retinal implants

Recovery of Fascicular Signals from Whole Nerve Recordings -- A Simulation Study

Dynamic Simulation and Testing of the Electrode-Electrolyte Interface of 3-D Stimulating Microelectrodes

Antidromic Action Potential Propagation in Branched Axons

Neural Synchronization Stability in the Tinnitus Decompensation

Muscle Synergies Robustly Control Forces for Balance Control

Linear Predictive Analysis for Targeting the Basal Ganglia in Deep Brain Stimulation Surgeries

Deep brain stimulation of the subthalamic nucleus: model-based analysis of the effects of electrode capacitance on the volume of activation

Modeling and simulation of electric fields generated by brain stimulation electrodes: the effect of cystic cavities in the basal ganglia

Advanced Analysis of Wearable Sensor Data to Adjust Medication Intake in Patients with Parkinson's Disease

Studying the role of spike timing in ensembles of neurons

Computational Study of Effect of Potassium Lateral Diffusion and Size of Extracellular Space on Neuronal Synchronization

An analog VLSI implementation of a multi-scale spike detection algorithm for extracellular neural recordings

Scale-Space Processing and Clustering for Efficient Multi-Electrode Data Analysis of Large-size Neuronal Ensembles

Multiresolution Representations and Data Mining of Neural Spikes for Brain-Machine Interfaces

A New Template Matching Method using Variance Estimation for Spike Sorting.

Pulse Frequency Demodulation Without Spike Detection

Compression of Spike Data Using the Self-Organizing Map

Modeling Biological Noise in Firing and Bursting Neurons in the Presence of an Electromagnetic Field

Feature Selection Based on Discriminant and Redundancy Analysis Applied to Seizure Detection in Newborn

Synaptic and Cellular Influences on the Composite EEG Signal During Seizures*

Biohybrid Retinal Implant: Research and Development Update in 2005

Quantitative Measures of Functional Upper Limb Movement in Persons after Stroke

Coherence between motor unit discharge patterns investigated using a motoneuron model

A Synaptogenic Pacing Cell Line

A Comparison of EEG Preprocessing Methods using Time Delay Neural Networks

Effects of a fast cable car ascent on the autonomic and central nervous system assessed by EEG and ECG analysis

Detection of Event-Related Spectral Changes in Electrocorticograms

Complex Valued Equivalent-Current Dipole Fits for MEG Responses

Detection of Sensory Events from Acute Spinal Cord Recordings

Quanti cation of movement regularity during internally generated and externally cued repetitive movements in patients with Parkinson's disease.

A Conductance-Based Silicon Neuron with Dynamically Tunable Model Parameters

Contributions of Parvocelular and Magnocellular Pathways to Metacontrast and Target Recovery

A Novel Feature Extraction Scheme for Myoelectric Signals Classification Using Higher Order Statistics

Design of Two-Dimensional Grid Electrodes Considering Spatial Characteristics of SEMG Signal

A Wavelet(MZ-DWT) Based Action Potential Detector at Low Signal-to-Noise Ratios

Use of a Genetic Algorithm for Neuron Model Specification

Silicon-based Neuromorphic Implementation of the Olfactory Pathway

Bioelectronic Artificial Nose Using Four-Channel Moth Antenna Biopotential Recordings

A Low-Power Spike Detection and Alignment Algorithm

Brain Computer Interface Design Using Band Powers Extracted During Mental Tasks

Imaging Locations of Neurons vs. Glia in Low Density Culture

The effect of training of cultured neuronal networks, can they learn ?

Extracellular Optical Recording Configuration for Neuronal Action Potential Detection by using Surface Plasmon Resonance: Preliminary Experiment

Analysis of Neurite Outgrowth for a Laser Patterned Neuronal Culture

High-Order Correlations of Neuronal Spontaneous Activity Signals

High Throughput Algorithms for Mapping the Topology of Neuronal and Glial Networks

Comparison of Phase-Coupling Indices for Tremor

Goal-directed state equation for tracking reaching movements using neural signals

Modeling Selective Stimulation With A Flat Interface Nerve Electrode for Standing Neuroprosthetic Systems

Simulation of Intramuscular EMG Signal Detection using Implantable MyoElectric Sensors

Characterizing Signatures of Evoked Brain Activity in Multiple Electrode Data from Different Brain Regions

An Implanted Upper Extremity Neuroprosthesis Utilizing Myoelectric Control

Implanted FES for Upright Mobility in Paediatric Spinal Cord Injury: A Follow-up Report

Classification of Motor Imagery Tasks by means of Time-Frequency-Spatial Analysis for Brain-Computer Interface Applications

An Integrated System for Multichannel Neuronal Recording with Spike / LFP Separation and Digital Output

An Analog VLSI Stimulation and Recording System for Extracelluar Interfacing

Analysis of In-vitro Neurite Extension for Neurotrophic Electrode Design

Reorganization of Neural Activity in Cerebral Cortex during Adaptation to External Force Perturbations of Reaching Movement

Neural Network Controller for an Upper Extremity Neuroprosthesis

Targeted muscle reinnervation for improved myoelectric prosthesis control

A Rapid Prototyping Environment for Neuroprotheses

Towards a Method for Peripheral Nervous System Axonal Stiffness Measurements with MEMS-based Microgrippers

Neural Processing Unit based on the Optical Bistable Properties of Semiconductor Laser Amplifiers

nxn Stimulator and Reader Design for Retinal Prosthesis using Multiplexing Technique and CMOS Technology

Wireless Headstage for Neural Prosthetics

Expediting the Identification of Impaired Cochlear Implant Acoustic Model Channels Through Confusion Matrix Analysis

Guaranteeing Quality in the Diagnosis of Electrocerebral Silence

Computer Simulation of Volume Conduction Based Data Communication Channel for Neuroprosthetic Devices

Continuous Quantitative Motor Evoked Potentials for Spinal Cord Injury Detection

Spontaneous bursts are better indicators of tetanus-induced plasticity than responses to probe stimuli

Force Tracking System for Training of Hand Function in Stroke Patients

Estimation of Walking Speed for Controlling Vehicle Using Neural Signals from Primary Motor Cortex of Rat

Neural Control of the Computer Cursor Based on Spectral Analysis of the Electromyogram

A Real-Time System for Small Animal Neurorobotics at Spinal or Cortical Levels.

Development of an implantable networked neuroprosthesis

Simulation of parallel current injection for use in a vision prosthesis

Effects of Electrode Miniaturization in Micromachined Neural Prostheses

Architecture Tradeoffs in High Density Microstimulators for Retinal Prosthesis

Development of a neuroprosthesis for restoring arm and hand function via functional electrical stimulation following high cervical spinal cord injury

Proportions of endpoint force pattern types obtained via intraspinal microstimulation in chronically spinalized cats are dependent on sensorimotor training

Electrical Stimulation of a Spinal Central Pattern Generator for Locomotion

Block of Mammalian Motor Nerve Conduction Using High Frequency Alternating Current

Deep Brain Stimulation for Obesity Control: Analyzing Stimulation Parameters to Modulate Energy Expenditure

Intraoperative Testing of Selectivity of Spiral Nerve Cuff Electrodes

Upper Limb Position Sensing: A Machine Vision Approach

A High Performance Neurally-Controlled Cursor Positioning System

Synchronous stereo-video and biosignal recording - a basic setup for Human-Computer-Interface applications

An event-driven neuro-fuzzy model for adaptive prognosis in homeostatic systems

Activation detection on FMRI time series using hidden Markov model

Generative Temporal ICA for Classification in Asynchronous BCI Systems

MeaBench: A toolset for multi-electrode data acquisition and on-line analysis

A Novel Dexamethasone-releasing, Anti-inflammatory Coating for Neural Implants

Design of High Performance Physiologically-Complex Motoneuron Models in FPGAs

Orderly recruitment order of peripheral nerve stimulation with electrode array

Design of a Wideband Power-Efficient Inductive Wireless Link for Implantable Biomedical Devices Using Multiple Carriers

The Effects of Electrical Stimulation Gait Training in the Child with Cerebral Palsy

Characterization of the cardiac response to Vagal Nerve Stimulation

High Efficiency Wireless Power Transmission with Digitally Configurable Stimulation Voltage for Retinal Prosthesis

The effect of passive torque on the kinematics of vestibular-evoked reflexive head movements

Time-frequency Features Differentiate Direction of Finger Movement in Cued and Self-paced Tasks

Instantaneous detection of neuro-oscillators using a portable tool

Movement Discrimination Based On Rat Primary Motor Cortex Responses

Novel Material for Patterned Neural Networks

Cognitive State Estimation Based on EEG for Augmented Cognition

Spatio-temporal Linear Discrimination for Inferring Task Difficulty from EEG

Enhancing Classification by Perceptual Characteristic for the P300 Speller Paradigm

Auditory P300 Differences Between Healthy and Schizophrenic Subjects Revealed by Single Trial Analysis

Subject Age in P300 BCI

Analysis and Visualization of Movement related EEG activities with Local Discriminant Bases

Both Interaural and Spectral Cues Impact Sound Localization in Azimuth

Adulthood Adaptive Plasticity of the Barn-Owl Auditory Localization System

Reorganization of Auditory Cortex by Pairing and Anti-Pairing Intracortical Microstimulation

Combining fMRI with Video Automated Perimetry in Patients with Brain-based Visual Impairments

Frequency Selection for SSVEP-based Binocular Rivalry

On subjective impressions or how to put numbers to visual illusions

Independent Component Analysis of Divergence Eye Movements

The Chaos And The Complexity of the Abnormal Oscillations Propagation in A 2-D Strong Coupling Neuronal Network

A Wavelet Based Approach for the Detection of Coupling in EEG Signals

Regional head conductivity estimation by the iterative sensitivity matrix method

Single trial EEG classification during finger movement task by using hidden Markov models

Diagnostic Implications of EEG Analysis in Patients with Dementia

Classification of Mental Tasks Using Fixed and Adaptive Autoregressive Models of EEG Signals

The Usefulness of the Auditory N100 and P200 Component as Measures of Sensory Gating

Spatio-temporal analysis of P300 using ICA and SSLOFO

Event-related Potential Study of Brain Activation during Word/Pictogram Perception by native Korean Speakers

A Neural Network Model for Human Performance Optimization in the Workplace

The time constants for the electric stimulation of nerve an muscle fibers by point electrodes

An investigation of inner light during Zen meditation using alpha-suppressed EEG and VEP

32-Channel Full Customized CMOS Biosensor Chip for Extracellular Neural Signal Recording

Activation-Blood Flow Coupling During Direct Somatosensory Cortical Stimulation in Living Rat Brain

Independent Brain Computer Interface Control using Visual Spatial Attention-Dependent Modulations of Parieto-occipital Alpha

A TinyOS-Based Wireless Neural Sensing, Archiving, and Hosting System

A Recording System for the Study of Tinnitus Through Auditory Evoked Potentials

A Combined Independent Component Analysis (ICA)/ Empirical Mode Decomposition (EMD) Method to Infer Corticomuscular Coupling

A New Overlapping Resolution Method for Multi-channel Spike Sorting

Event-Triggered Electrical Control of Urinary Continence

The Detection of Seizure Vulnerable Period from Epidural EEG Recordings of Epilepsy Rat

Close-Contact, Human-Interactive Technologies

First International IEEE EMBS Conference on Neural Engineering, 2003. Conference Proceedings.

MeaBench: A toolset for multi-electrode data acquisition and on-line analysis

Content Provider	IEEE Xplore Digital Library
Author	Wagenaar, D. DeMarse, T.B. Potter, S.M.
Copyright Year	2005
Description	Author affiliation: Dept. of Phys., Caltech, Pasadena, CA (Wagenaar, D.)
Abstract	We present a software suite, MeaBench, for data acquisition and online analysis of multi-electrode recordings, especially from micro-electrode arrays. Besides controlling data acquisition hardware, MeaBench includes algorithms for real-time stimulation artifact suppression and spike detection, as well as programs for online display of voltage traces from 60 electrodes and continuously updated spike raster plots. MeaBench features real-time output streaming, allowing easy integration with stimulator systems. We have been able to generate stimulation sequences in response to live neuronal activity with less than 20 ms lag time. MeaBench is open-source software, and is available for free public download at http://www.its.caltech.edu/~pinelab/wagenaar/meabench.html
Starting Page	518
Ending Page	521
File Size	2817945
Page Count	4
File Format	PDF
ISBN	0780387104
DOI	10.1109/CNE.2005.1419673
Language	English
Publisher	Institute of Electrical and Electronics Engineers, Inc. (IEEE)
Publisher Date	2005-03-16
Publisher Place	USA
Access Restriction	Subscribed
Rights Holder	Institute of Electrical and Electronics Engineers, Inc. (IEEE)
Subject Keyword	Electrodes Software maintenance Data analysis Data acquisition Data visualization Voltage Hardware Mathematical model Probes Open source software
Content Type	Text
Resource Type	Article

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