NDLI: Phylogenetic analysis of ZmPP2C, a protein phosphatase 2C gene from Zea mays

Content Provider	IEEE Xplore Digital Library
Author	Lixia Liu
Copyright Year	2009
Description	Author affiliation: Agronomy Department, Dezhou University, 253023, China (Lixia Liu)
Abstract	ZmPP2C was a protein phosphatase 2C gene that we cloned from maize roots. It is an important type of protein phosphatase family. AlignX is a software which can compare homology of many proteins or nucleic acids and search homologous fragments or different bases in high similarity sequences. This paper makes use of the AlignX program to visualize and analyze DNA sequences of ZmPP2C comparing with other protein phosphatase 2C from Arabidopsis and other plants. Based on the AlignX program, we map the phyligenetic trees and analyse them. The conclusion shows that ZmPP2C has high homology with MPC9 from Mesembryanthemum crystallinum Linn (ice plant). And in another phylogenetic analysis of ZmPP2C and all PP2Cs from Arabidopsis thaliana (Arabidopsis), ZmPP2C has high homology with Group F, which was classified by enzyme-catalyzed region.
Starting Page	308
Ending Page	310
File Size	691744
Page Count	3
File Format	PDF
ISBN	9781424446902
DOI	10.1109/FBIE.2009.5405912
Language	English
Publisher	Institute of Electrical and Electronics Engineers, Inc. (IEEE)
Publisher Date	2009-12-13
Publisher Place	China
Access Restriction	Subscribed
Rights Holder	Institute of Electrical and Electronics Engineers, Inc. (IEEE)
Subject Keyword	Protein engineering Visualization Sequences Zea mays Arabidopsis Amino acids Biochemistry Phylogeny Stress Phylogenetic analysis Databases DNA Protein phosphatase 2C Biomedical engineering
Content Type	Text
Resource Type	Article

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