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Comparative Analysis of the Complete Genome of Lactobacillus plantarum GB-LP2 and Potential Candidate Genes for Host Immune System Enhancement.

Content Provider	World Health Organization (WHO)-Global Index Medicus
Author	Kwak, Woori Kim, Kwondo Lee, Chul Lee, Chanho Kang, Jungsun Cho, Kyungjin Yoon, Sook Hee Kang, Dae-Kyung Kim, Heebal Heo, Jaeyoung Cho, Seoae
Description	Author Affiliation: Kwak W ( C&K Genomics, Seoul 08826, Republic of Korea.); Kim K ( Interdisciplinary Program in Bioinformatics, Seoul National University, Seoul 08826, Republic of Korea.); Lee C ( C&K Genomics, Seoul 08826, Republic of Korea.); Lee C ( Interdisciplinary Program in Bioinformatics, Seoul National University, Seoul 08826, Republic of Korea.); Kang J ( Genebiotech Co. Ltd., Seoul 06774, Republic of Korea.); Cho K ( Genebiotech Co. Ltd., Seoul 06774, Republic of Korea.); Yoon SH ( Genebiotech Co. Ltd., Seoul 06774, Republic of Korea.); Kang DK ( Department of Agricultural Biotechnology and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul 08826, Republic of Korea.); Kim H ( Department of Animal Resources Science, Dankook University, Cheonan 31116, Republic of Korea.); Heo J ( Department of Agricultural Biotechnology and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul 08826, Republic of Korea.); Cho S ( C&K Genomics, Seoul 08826, Republic of Korea.)
Abstract	Acute respiratory virus infectious diseases are a growing health problem, particularly among children and the elderly. Much effort has been made to develop probiotics that prevent influenza virus infections by enhancing innate immunity in the respiratory tract until vaccines are available. Lactobacillus plantarum GB-LP2, isolated from a traditional Korean fermented vegetable, has exhibited preventive effects on influenza virus infection in mice. To identify the molecular basis of this strain, we conducted a whole-genome assembly study. The single circular DNA chromosome of 3,284,304 bp was completely assembled and 3,250 proteinencoding genes were predicted. Evolutionarily accelerated genes related to the phenotypic trait of anti-infective activities for influenza virus were identified. These genes encode three integral membrane proteins, a teichoic acid export ATP-binding protein and a glucosamine - fructose-6-phosphate aminotransferase involved in host innate immunity, the nonspecific DNA-binding protein Dps, which protects bacteria from oxidative damage, and the response regulator of the three-component quorum-sensing regulatory system, which is related to the capacity of adhesion to the surface of the respiratory tract and competition with pathogens. This is the first study to identify the genetic backgrounds of the antiviral activity in L. plantarum strains. These findings provide insight into the anti-infective activities of L. plantarum and the development of preventive probiotics.
File Format	HTM / HTML
ISSN	10177825
e-ISSN	17388872
Journal	Journal of Microbiology and Biotechnology
Issue Number	4
Volume Number	26
Language	English
Publisher	Korean Society for Microbiology and Biotechnology
Publisher Date	2016-04-28
Publisher Place	Korea (South)
Access Restriction	Open
Subject Keyword	Discipline Microbiology Discipline Biotechnology
Content Type	Text
Resource Type	Article
Subject	Medicine Applied Microbiology and Biotechnology Biotechnology

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