NDLI: MetaG: a graph-based metagenomic gene analysis for big DNA data

Content Provider	Springer Nature Link
Author	Deb, Kaushik Kamal, Sarwar Khan, Mohammad Ibrahim Chowdhury, Linkon
Copyright Year	2016
Abstract	Microbial interactions and relationships are significant for animals, insects and plants. Metagenomic research enables properassessments and analysis for microbial organs and communities. The analysis helps to gain detailed insights on miscopies insects. Recent machine learning techniques focused on algorithms and data mining tools to check the depth of interactions and relationships on metagenomic dataset. Accurate analysis over large genes helps to solve real-world problems for public interest. In this regard, graph-centric big gene dataset representations are very important. De Bruijn graph is one the pivotal media to demonstrate the relationships and interactions of large genes dataset or metagenomic dataset. In this research, mapping-based metagenomic graphical (MetaG) genomes representation has been demonstrated. Data cleaning is done before applying graphical illustration. Random mapping is used to assess the variations in dataset. Euler path-based De Bruijn graph is used to sketch the gene annotation, translations, signaling and coding. This research helps in computational biology to map the genomic information in graphical ways with clear conceptions. Adequate experimental comparisons as well as analysis established the claims with tables and graphs.
Starting Page	1
Ending Page	16
Page Count	16
File Format	PDF
ISSN	21926662
Journal	Network Modeling Analysis in Health Informatics and Bioinformatics
Volume Number	5
Issue Number	1
e-ISSN	21926670
Language	English
Publisher	Springer Vienna
Publisher Date	2016-07-15
Publisher Place	Vienna
Access Restriction	One Nation One Subscription (ONOS)
Subject Keyword	De Bruijn graph Computational Biology/Bioinformatics Metagenomic Health Informatics Euler path Bioinformatics Coding regions Applications of Graph Theory and Complex Networks
Content Type	Text
Resource Type	Article
Subject	Urology

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1	Ministry of Education (GoI), Department of Higher Education	Sanctioning Authority	https://www.education.gov.in/ict-initiatives
2	Indian Institute of Technology Kharagpur	Host Institute of the Project: The host institute of the project is responsible for providing infrastructure support and hosting the project	https://www.iitkgp.ac.in
3	National Digital Library of India Office, Indian Institute of Technology Kharagpur	The administrative and infrastructural headquarters of the project	Dr. B. Sutradhar bsutra@ndl.gov.in
4	Project PI / Joint PI	Principal Investigator and Joint Principal Investigators of the project	Dr. B. Sutradhar bsutra@ndl.gov.in Prof. Saswat Chakrabarti will be added soon
5	Website/Portal (Helpdesk)	Queries regarding NDLI and its services	support@ndl.gov.in
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9	IDR Setup or Support	Queries related to establishment and support of Institutional Digital Repository (IDR) and IDR workshops	idr@ndl.gov.in

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