NDLI: Characterisation of novel S-alleles from cherry (Prunus avium L.)

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Characterisation of novel S-alleles from cherry (Prunus avium L.)

Content Provider	Springer Nature Link
Author	Vaughan, S. P. Bošković, R. I. Gisbert Climent, A. Russell, K. Tobutt, K. R.
Copyright Year	2008
Abstract	In plant populations exhibiting gametophytic self-incompatibility, individuals harbouring rare S alleles are likely to have a reproductive advantage over individuals having more common alleles. Consequently, determination of the self-incompatibility haplotype of individuals is essential for genetic studies and the development of informed management strategies. This study characterises six new S alleles identified in wild cherry (Prunus avium L.). Investigations to determine the S genotype of individuals in recently planted woodland through length polymorphisms of introns associated with the stylar S-RNase gene and the pollen SFB gene revealed six S intron profiles which did not correspond to those of known S alleles. These are now attributed to S $_{ 27 }$ to S $_{ 32 }$. Consensus primers, annealing in the S-RNase sequence coding for the signal peptide and C5 regions, were used to isolate the S-RNase alleles associated with the novel S intron profiles. The proteins corresponding to the new alleles were separated by isoelectric focusing from stylar extracts and their pI values determined. Similarities between the deduced amino acid sequence for the new alleles isolated and other cherry S-RNase sequences available on the databases ranged from 40% to 86%. Amplification products for SFB introns ranged from 172 to 208bp. New sequence regions exposed to positive selection were identified and the significance of the PS3 region reinforced. A phylogenetic relationship between P. avium S-RNases for S $_{ 10 }$ and S $_{ 13 }$ and between corresponding SFB alleles may indicate co-evolution of allele specificities of these two genes.
Starting Page	531
Ending Page	541
Page Count	11
File Format	PDF
ISSN	16142942
Journal	Tree Genetics & Genomes
Volume Number	4
Issue Number	3
e-ISSN	16142950
Language	English
Publisher	Springer-Verlag
Publisher Date	2008-03-13
Publisher Place	Berlin, Heidelberg
Access Restriction	One Nation One Subscription (ONOS)
Subject Keyword	Cherry Prunus Self-incompatibility Biotechnology Tree Biology Plant Breeding/Biotechnology Plant Genetics & Genomics Forestry
Content Type	Text
Resource Type	Article
Subject	Genetics Molecular Biology Horticulture Forestry

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