NDLI: Molecular typing of the self-incompatibility locus of Turkish sweet cherry genotypes reflects phylogenetic relationships among cherries and other Prunus species

Content Provider	Springer Nature Link
Author	Szikriszt, B. Doğan, A. Ercisli, S. Akcay, M. E. Hegedűs, A. Halász, J.
Copyright Year	2012
Abstract	Self-incompatibility of sweet cherry (Prunus avium L.) is controlled by the multiallelic S-locus. While many cultivars and wild accessions have been S-genotyped, only limited data are available on accessions native to the center of origin of this species. Therefore, this study was carried out to determine the S-genotype of 11 landrace cultivars and 17 local genotypes selected from populations growing wild at the Black Sea coast. Eleven sweet cherries (S $_{1}$–S $_{7}$, S $_{10}$, and S $_{12}$–S $_{14}$) and some wild cherries (S $_{17}$–S $_{19}$, S $_{21/25}$, and S $_{31}$) S-RNase alleles were detected. The results indicate that Turkish cultivars represent a broader gene pool as compared with international cultivars. A new (S $_{37}$) and a doubtful allele (provisionally labelled as S $_{7m}$) as well as the sour cherry S $_{34}$-allele were identified in sweet cherry. These data and others (SSR variants within the S $_{13}$-RNase introns) confirmed that allele pools of sweet and sour cherries in the Black Sea region are overlapping. A new cross-incompatibility group, XLV (S $_{2}$ S $_{18}$), was also proposed. Allele-specific primers were designed for S $_{17}$–S $_{19}$, S $_{21/25}$, S $_{34}$, and S $_{37}$. A phylogenetic analysis of the cherry S $_{31}$-RNase and its trans-specific sister alleles reliably mirrored the assumed length of the time period after the divergence of species in the subgenera Cerasus and Prunophora. Most variations (insertions/deletions and single-nucleotide polymorphisms) in the S-RNase gene were silent and, hence, have not been exposed to natural selection. The results are discussed from the aspects of S-allele evolution and phylogenetic relationships among cherries and other Prunus species.
Starting Page	155
Ending Page	165
Page Count	11
File Format	PDF
ISSN	16142942
Journal	Tree Genetics & Genomes
Volume Number	9
Issue Number	1
e-ISSN	16142950
Language	English
Publisher	Springer-Verlag
Publisher Date	2012-07-11
Publisher Place	Berlin, Heidelberg
Access Restriction	One Nation One Subscription (ONOS)
Subject Keyword	Cherry Crop evolution S-RNase S-allele diversity Self-incompatibility S-genotyping SNP Forestry Plant Genetics & Genomics Plant Breeding/Biotechnology Tree Biology Biotechnology
Content Type	Text
Resource Type	Article
Subject	Genetics Molecular Biology Horticulture Forestry

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