NDLI: DIPOS: database of interacting proteins in Oryza sativa

Content Provider	Royal Society of Chemistry (RSC)
Author	Sapkota, Achyut Liu, Jingdong Liu, Zhi-Ping Cao, Yongwei Liu, Xiaoping Zhao, Xing-Ming Chen, Luonan
Copyright Year	2011
Abstract	Rice is an important crop throughout the world and is the staple food for about half the world's population. For better breeding and improved production, we need to know the function of rice molecules which facilitate their function through interactions with each other. The database of interacting proteins in Oryza sativa (DIPOS) provides comprehensive information of interacting proteins in rice, where the interactions are predicted using two computational methods, i.e., interologs and domain based methods. DIPOS contains 14 614 067 pairwise interactions among 27 746 proteins, covering about 41% of the whole Oryaza sativa proteome. Furthermore, each interaction is assigned a confidence score which further enables biologists to sort out the important proteins. Biological explanations of pathways and interactions are also provided based on the database. Public access to the DIPOS is available at http://csb.shu.edu.cn/dipos and http://ppi.riceresearch.info.
Starting Page	2615
Ending Page	2621
Page Count	7
File Format	HTM / HTML PDF
ISSN	1742206X
Volume Number	7
Issue Number	9
Journal	Molecular BioSystems
DOI	10.1039/c1mb05120b
Language	English
Publisher	Royal Society of Chemistry
Access Restriction	Open
Subject Keyword	Oryza sativa Oryza Proteome Rice
Content Type	Text
Resource Type	Article
Subject	Molecular Biology Biotechnology

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DIPOS: database of interacting proteins in Oryza sativa