NDLI: Evaluation of allergenic potential for rice seed protein components utilizing a rice proteome database and an allergen database in combination with IgE-binding of recombinant proteins.

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Evaluation of allergenic potential for rice seed protein components utilizing a rice proteome database and an allergen database in combination with IgE-binding of recombinant proteins.

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Evaluation of allergenic potential for rice seed protein components utilizing a rice proteome database and an allergen database in combination with IgE-binding of recombinant proteins.

Content Provider	World Health Organization (WHO)-Global Index Medicus
Author	Hirano, Kana Hino, Shingo Oshima, Kenzi Nadano, Daita Urisu, Atsuo Takaiwa, Fumio Matsuda, Tsukasa
Description	Country affiliation: Japan Author Affiliation: Hirano K ( a Department of Applied Molecular Biosciences, Graduate School of Bioagricultural Sciences , Nagoya University , Nagoya , Japan.); Hino S ( b Department of Food and Nutritional Environment , College of Human Life Environment, Kinjo Gakuin University , Nagoya , Japan.); Oshima K ( a Department of Applied Molecular Biosciences, Graduate School of Bioagricultural Sciences , Nagoya University , Nagoya , Japan.); Nadano D ( c Faculty of Agriculture, Department of Applied Biological Chemistry , Shizuoka University , Shizuoka , Japan.); Urisu A ( a Department of Applied Molecular Biosciences, Graduate School of Bioagricultural Sciences , Nagoya University , Nagoya , Japan.); Takaiwa F ( a Department of Applied Molecular Biosciences, Graduate School of Bioagricultural Sciences , Nagoya University , Nagoya , Japan.); Matsuda T ( d Department of Pediatrics , Fujita Health University, The Second Teaching Hospital , Nagoya , Japan.)
Abstract	Among 131 rice endosperm proteins previously identified by MS-based proteomics, most of the proteins showed low or almost no sequence similarity to known allergens in databases, whereas nine proteins did it significantly. The sequence of two proteins showed high overall identity with Hsp70-like hazel tree pollen allergen (Cor a 10) and barley -amylase (Hor v 16), respectively, whereas the others showed low identity (28-58%) with lemon germin-like protein (Cit l 1), corn zein (Zea m 50 K), wheat chitinase-like xylanase inhibitor (Tri a XI), and kinase-like pollen allergen of Russian thistle (Sal k 1). Immuno-dot blot analysis showed that recombinant proteins for these rice seed homologs were positive in the IgE-binding, but not necessarily similarity dependent, from some allergic patients. These results suggest that utilization of proteome and sequence databases in combination with IgE-binding analysis was effective to screen and evaluate allergenic potential of rice seed protein components.
File Format	HTM / HTML
ISSN	09168451
e-ISSN	13476947
Journal	Bioscience, Biotechnology, and Biochemistry
Issue Number	3
Volume Number	80
Language	English
Publisher	Taylor & Francis
Publisher Date	2016-01-01
Publisher Place	Great Britain (UK)
Access Restriction	One Nation One Subscription (ONOS)
Subject Keyword	Discipline Biochemistry Discipline Biotechnology Allergens Immunology Databases, Protein Immunoglobulin E Oryza Sativa Plant Proteins Embryology Proteome Recombinant Proteins Research Support, Non-u.s. Gov't
Content Type	Text
Resource Type	Article
Subject	Organic Chemistry Medicine Analytical Chemistry Molecular Biology Biochemistry Applied Microbiology and Biotechnology Biotechnology

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Evaluation of allergenic potential for rice seed protein components utilizing a rice proteome database and an allergen database in combination with IgE-binding of recombinant proteins.

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