NDLI: SNPs at 3'-UTR of the bovine CDIPT gene associated with Qinchuan cattle meat quality traits.

Please wait, while we are loading the content...

Year: 2016 Volume: 15

Year: 2016 Volume: 14

Year: 2015 Volume: 14

Year: 2014 Volume: 13

Year: 2013 Volume: 12

Year: 2013 Volume: 12 Issue: 4

Year: 2013 Volume: 12 Issue: 3

Year: 2013 Volume: 12 Issue: 2

Year: 2013 Volume: 12 Issue: 1

Identification of earl millet cultivars using both microsatellites and enzymatic markers.

Adenovirus-mediated interference of FABP4 regulates mRNA expression of ADIPOQ, LEP and LEPR in bovine adipocytes.

Interspecific hybridization between Tigridia pavonia and T. augusta through ovary slice culture.

Allelic frequencies and statistical data obtained from 15 STR loci in a population of the Goiás State.

Assessment of BCL2/J(H) translocation in healthy individuals exposed to low-level radiation of 137CsCl in Goiânia, Goiás, Brazil.

Genes expressed in cotton (Gossypium hirsutum) buds isolated with a subtractive library.

Amplifiability of mitochondrial, microsatellite and amelogenin DNA loci from fecal samples of red brocket deer Mazama americana (Cetartiodactyla, Cervidae).

Lack of mutations of G4.5 in three families from China with noncompaction of the ventricular myocardium.

Association study between Y-chromosome haplogroups and susceptibility to spermatogenic impairment in Han People from southwest China.

The genetic variant rs401681C/T is associated with the risk of non-small cell lung cancer in a Chinese mainland population.

Meta-analysis demonstrates lack of association between the ACE gene I/D polymorphism and obstructive sleep apnea-hypopnea syndrome occurrence and severity.

Molecular cloning and characterization of the pseudorabies virus US1 gene.

Genetic diversity in the germplasm of tropical maize landraces determined using molecular markers.

Phenotypic and molecular characterization of a tomato (Solanum lycopersicum L.) F2 population segregation for improving shelf life.

Supplemental leucine and isoleucine affect expression of cationic amino acid transporters and myosin, serum concentration of amino acids, and growth performance of pigs.

Transcriptional activity of an ovarian-specific promoter from rat in dairy goat granulosa cells.

Demographic characterization of Brazilian patients enrolled in the Fabry Registry.

Comparison of random regression models to estimate genetic parameters for milk production in Guzerat (Bos indicus) cows.

Cross-species amplification of selected zebrafish, central stoneroller, and finescale dace microsatellites in lake minnow populations.

Association of P2X7 gene polymorphisms with susceptibility to pulmonary tuberculosis in Zahedan, Southeast Iran.

Lack of association between TYK2 and STAT3 genes and Crohn's disease in the Malaysian population.

An efficient approach to identify Ginkgo biloba cultivars by using random amplified polymorphic DNA markers with a manual cultivar identification diagram strategy.

Characterization of Chinese eggplant isolates of the fungal pathogen Verticillium dahliae from different geographic origins.

Analysis of genetic diversity in Larix gmelinii (Pinaceae) with RAPD and ISSR markers.

Polymorphisms in FGFBP1 and FGFBP2 genes associated with carcass and meat quality traits in chickens.

Efficient isolation of high-quality RNA from lotus Nelumbo nucifera ssp nucifera tissues.

Development of microsatellite markers for the Neotropical endemic Brazilian Guanabara frog, Euparkerella brasiliensis, through 454 shotgun pyrosequencing.

Association of T1740C polymorphism of L-FABP with meat quality traits in Junmu No. 1 white swine.

Characterization of polymorphic microsatellite markers for the Neotropical leaf-frog Phyllomedusa burmeisteri and cross-species amplification.

Snap bean recommendation based on different methods of phenotypic stability.

Genetic diversity analysis in Opal cotton hybrids based on SSR, ISSR, and RAPD markers.

Genetic divergence among Brazilian garlic cultivars based on morphological characters and AFLP markers.

Simple and inexpensive DNA extraction protocol for studying the bacterial composition of sludges used in microbial fuel cells.

Molecular cloning and characterization of GbDXS and GbGGPPS gene promoters from Ginkgo biloba.

An alternate method for DNA and RNA extraction from clotted blood.

5-Aza-2'-deoxycytidine may influence the proliferation and apoptosis of cervical cancer cells via demethylation in a dose- and time-dependent manner.

Identification of resistance gene analogs in Korean wild apple germplasm collections.

Characterization of chicken natural resistance-associated macrophage protein encoding genes (Nramp1 and Nramp2) and association with salmonellosis resistance.

Somatic copy-neutral loss of heterozygosity and copy number abnormalities in Malaysian sporadic colorectal carcinoma patients.

Meta-analysis demonstrates association between TLR polymorphisms and rheumatoid arthritis.

SRAP analysis of DNA base sequence changes in lotus mutants induced by Feâ º implantation.

Characterization of eight novel microsatellite markers in the green-lipped mussel Perna viridis (Mytilidae).

Structure and dynamics of the monomer of protein E of dengue virus type 2 with unprotonated histidine residues.

Microsatellite markers for genetic studies of the fall armyworm, Spodoptera frugiperda.

Selection of processing tomato genotypes with high acyl sugar content that are resistant to the tomato pinworm.

Polymorphisms of the bovine growth differentiation factor 9 gene associated with superovulation performance in Chinese Holstein cows.

Entropy-based approach for selecting informative regions in the L1 gene of bovine papillomavirus for phylogenetic inference and primer design.

Comparison of winter and summer canola (Brassica napus) genotypes in Turkey.

Isolation and characterization of 8 microsatellite loci from Chrysophyllum gonocarpum (Sapotaceae).

Structural and functional characterization of the Colletotrichum lindemuthianum nit1 gene, which encodes a nitrate eductase enzyme.

Meta-analysis demonstrates association of the TGF-ß1 gene -C509T polymorphism with susceptibility to IgA nephropathy in European but not in Asian populations.

Distribution of mating-type alleles and M13 PCR markers in the black leaf spot fungus Mycosphaerella fijiensis of bananas in Brazil.

Evolutionary analysis of the short-type peptidoglycan-recognition protein gene (PGLYRP1) in primates.

Chromosomal diversity in Hypostomus (Siluriformes, Loricariidae) with emphasis on physical mapping of 18S and 5S rDNA sites.

Identification and association of polymorphisms in CAPN1 and CAPN3 candidate genes related to performance and meat quality traits in chickens.

Evaluation of the mutagenicity and antimutagenicity of soy phytoestrogens using micronucleus and comet assays of the peripheral blood of mice.

Random regression models in the evaluation of the growth curve of Simbrasil beef cattle.

In silico comparative analysis and expression profile of antioxidant proteins in plants.

Genotypic variability for root/shoot parameters under water stress in some advanced lines of cotton (Gossypium hirsutum L.).

More severe clinical course of cardiovascular dysfunction in intensive care unit patients with the 894TT eNOS genotype.

Genetic diversity and mating system of Copaifera langsdorffii (Leguminosae/Caesalpinioideae).

Lack of association of IL-2RA and IL-2RB polymorphisms with rheumatoid arthritis in a Han Chinese population.

Synonymous codon usage patterns in different parasitic platyhelminth mitochondrial genomes.

Diversity and genetic structure among subpopulations of Gossypium mustelinum (Malvaceae).

Synthesis of periclinal chimera in cassava.

Molecular taxonomy and evolutionary hypothesis concerning Astyanax fasciatus (Characiformes, Characidae) from Vila Velha State Park and Tibagi and Iguaçu Rivers.

Characterization of SNPs in strawberry cultivars in China.

Molecular analysis and frequency of Staphylococcus aureus virulence genes isolated from bloodstream infections in a teaching hospital in Tianjin, China.

Genetic diversity of Burkholderia (Proteobacteria) species from the Caatinga and Atlantic rainforest biomes in Bahia, Brazil.

Involvement of ERK1/2 signaling in proliferation of eight liver cell types during hepatic regeneration in rats.

A novel COL7A1 mutation in a Korean patient with Hallopeau-Siemens recessive dystrophic epidermolysis bullosa.

Molecular cytogenetic characterization of the Aegilops biuncialis karyotype.

Intracellular localization and association of MHC class I with porcine invariant chain.

A non-destructive genotyping system from a single seed for marker-assisted selection in watermelon.

Confirmation of a purple-leaved plum graft hybrid.

Accurate monitoring of promoter gene methylation with high-resolution melting polymerase chain reaction using the ABCB1 gene as a model.

Assessment of phylogenetic relationship of rare plant species collected from Saudi Arabia using internal transcribed spacer sequences of nuclear ribosomal DNA.

Identification and analysis of phospholipid transfer protein polymorphisms and their association with marbling score in Hanwoo (Korean cattle).

Protein interaction and microRNA network analysis in osteoarthritis meniscal cells.

Genetic variability of watermelon accessions based on microsatellite markers.

Production of interspecific hybrids between commercial cultivars of the eggplant (Solanum melongena L.) and its wild relative S. torvum.

Serum lipid abnormalities are not associated with apoB 3' VNTR polymorphism in nephrotic children.

SNPs at 3'-UTR of the bovine CDIPT gene associated with Qinchuan cattle meat quality traits.

Isolation and phylogenetic analysis of novel Î³-gliadin genes in genus Dasypyrum.

Genetic diversity among red swamp crayfish (Procambarus clarkii) populations in the middle and lower reaches of the Yangtze River based on AFLP markers.

Frequency of MDR1 single nucleotide polymorphisms in a Jordanian population, including a novel variant.

Promoter methylation negatively correlated with mRNA expression but not tissue differential expression after heat stress.

Effect of IL-18 gene promoter polymorphisms on prostate cancer occurrence and prognosis in Han Chinese population.

Mitochondrial DNA variability in populations of Centris aenea (Hymenoptera, Apidae), a crop-pollinating bee in Brazil.

Molecular response of human cervical and lumbar nucleus pulposus cells from degenerated discs following cytokine treatment.

Cathecol-O-methyl transferase Val158Met genotype is not a risk factor for conversion disorder.

Breeding new seedless grape by means of in vitro embryo rescue.

Year: 2012 Volume: 11

Year: 2011 Volume: 10

Year: 2010 Volume: 9

Year: 2009 Volume: 8

Year: 2008 Volume: 7

Year: 2007 Volume: 6

Year: 2006 Volume: 5

Year: 2005 Volume: 4

Year: 2004 Volume: 3

Year: 2003 Volume: 2

Year: 2002 Volume: 1

SNPs at 3'-UTR of the bovine CDIPT gene associated with Qinchuan cattle meat quality traits.

Content Provider	World Health Organization (WHO)-Global Index Medicus
Author	Mei, C. G. Fu, C. Z. Wang, J. L. Jiang, B. J. Wang, H. B. Cheng, G. Wang, H. Ma, X. H. Zan, L. S.
Spatial Coverage	China
Description	Country affiliation: China Author Affiliation: Fu CZ ( Animal Science and Technology College, Northwest A&F University, Yangling, Shaanxi, China.)
Abstract	The CDIPT is crucial to the fatty acid metabolic pathway, intracellular signal transduction and energy metabolism in eukaryotic cells. We detected three SNPs at 3'-untranslated regions (UTR), named 3'-UTR_108 A > G, 3'-UTR_448 G > A and 3'-UTR_477 C > G, of the CDIPT gene in 618 Qinchuan cattle using PCR-RFLP and DNA sequencing methods. At each of the three SNPs, we found three genotypes named as follows: AA, AB, BB (3'-UTR_108 A > G), CC, CD, DD (3'-UTR_448 G > A) and EE, EF, FF (3'-UTR_477 C > G.). Based on association analysis of these SNPs with ultrasound measurement traits, individuals of genotype BB had a significantly larger loin muscle area than genotype AA. Individuals of genotype CC had significantly thicker back fat than individuals of genotype DD. Individuals of genotype EE also had significantly thicker back fat than did individuals of genotype FF. We conclude that these SNPs of the CDIPT gene could be used as molecular markers for selecting and breeding beef cattle with superior body traits, depending on breeding goals.
e-ISSN	16765680
Journal	Genetics and Molecular Research
Issue Number	1
Volume Number	12
Language	English
Publisher	Fundação de Pesquisas Científicas de Ribeirão Preto
Publisher Date	2013-03-13
Publisher Place	Brazil
Access Restriction	Open
Subject Keyword	3' Untranslated Regions Genetics Cdp-diacylglycerol-inositol 3-phosphatidyltransferase Meat Polymorphism, Single Nucleotide Animals Metabolism Fats Gene Frequency Genotype Muscles Polymerase Chain Reaction Polymorphism, Restriction Fragment Length Sequence Analysis, Dna Research Support, Non-u.s. Gov't Discipline Genetics Discipline Molecular Biology Discipline Bioinformatics
Content Type	Text
Resource Type	Article

Central Library (ISO-9001:2015 Certified)
Indian Institute of Technology Kharagpur
Kharagpur, West Bengal, India | PIN - 721302

See location in the Map
03222 282435
Mail: support@ndl.gov.in

Sl.	Authority	Responsibilities	Communication Details
1	Ministry of Education (GoI), Department of Higher Education	Sanctioning Authority	https://www.education.gov.in/ict-initiatives
2	Indian Institute of Technology Kharagpur	Host Institute of the Project: The host institute of the project is responsible for providing infrastructure support and hosting the project	https://www.iitkgp.ac.in
3	National Digital Library of India Office, Indian Institute of Technology Kharagpur	The administrative and infrastructural headquarters of the project	Dr. B. Sutradhar bsutra@ndl.gov.in
4	Project PI / Joint PI	Principal Investigator and Joint Principal Investigators of the project	Dr. B. Sutradhar bsutra@ndl.gov.in Prof. Saswat Chakrabarti will be added soon
5	Website/Portal (Helpdesk)	Queries regarding NDLI and its services	support@ndl.gov.in
6	Contents and Copyright Issues	Queries related to content curation and copyright issues	content@ndl.gov.in
7	National Digital Library of India Club (NDLI Club)	Queries related to NDLI Club formation, support, user awareness program, seminar/symposium, collaboration, social media, promotion, and outreach	clubsupport@ndl.gov.in
8	Digital Preservation Centre (DPC)	Assistance with digitizing and archiving copyright-free printed books	dpc@ndl.gov.in
9	IDR Setup or Support	Queries related to establishment and support of Institutional Digital Repository (IDR) and IDR workshops	idr@ndl.gov.in