NDLI: Seasonal dynamics of harmful algae in outer Oslofjorden monitored by microarray, qPCR, and microscopy.

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Capillary electrophoresis finger print technique (CE-SSCP): an alternative tool for the monitoring activities of HAB species in Baja California Sur Costal.

GPR-Analyzer: a simple tool for quantitative analysis of hierarchical multispecies microarrays.

Review: advances in electrochemical genosensors-based methods for monitoring blooms of toxic algae.

Introduction to project MIDTAL: its methods and samples from Arcachon Bay, France

Chemical- and effect-oriented exposomics: Three Gorges Reservoir (TGR).

An evaluation of the applicability of microarrays for monitoring toxic algae in Irish coastal waters.

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Case study on rehabilitation of a polluted urban water body in Yangtze River Basin

Water mass interaction in the confluence zone of the Daning River and the Yangtze River--a driving force for algal growth in the Three Gorges Reservoir.

The quantitative real-time PCR applications in the monitoring of marine harmful algal bloom (HAB) species.

Multiplex biotoxin surface plasmon resonance method for marine biotoxins in algal and seawater samples.

The response of mulberry trees after seedling hardening to summer drought in the hydro-fluctuation belt of Three Gorges Reservoir Areas.

Molecular probes and microarrays for the detection of toxic algae in the genera Dinophysis and Phalacroma (Dinophyta).

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Conservation and ecofriendly utilization of wetlands associated with the Three Gorges Reservoir.

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The littoral zone in the Three Gorges Reservoir, China: challenges and opportunities.

Continuous automated imaging-in-flow cytometry for detection and early warning of Karenia brevis blooms in the Gulf of Mexico.

Seasonal dynamics of harmful algae in outer Oslofjorden monitored by microarray, qPCR, and microscopy.

Approximation and spatial regionalization of rainfall erosivity based on sparse data in a mountainous catchment of the Yangtze River in Central China.

Molecular probes for the detection and identification of ichthyotoxic marine microalgae of the genus Pseudochattonella (Dictyochophyceae, Ochrophyta).

An integrated approach to model the biomagnification of organic pollutants in aquatic food webs of the Yangtze Three Gorges Reservoir ecosystem using adapted pollution scenarios.

Dechlorination and organohalide-respiring bacteria dynamics in sediment samples of the Yangtze Three Gorges Reservoir.

Manganese and iron oxide immobilized activated carbons precursor to dead biomasses in the remediation of cadmium-contaminated waters

Plant community characteristics and their responses to environmental factors in the water level fluctuation zone of the three gorges reservoir in China.

Effects of natural organic matter on the microporous sorption sites of black carbon in a Yangtze River sediment

Solution by dilution?--A review on the pollution status of the Yangtze River.

The effects of Herba Andrographitis hedgerows on soil erodibility and fractal features on sloping cropland in the Three Gorges Reservoir Area.

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Residential proximity to gasoline service stations and preterm birth.

5-Aminolevulinic acid ameliorates cadmium-induced morphological, biochemical, and ultrastructural changes in seedlings of oilseed rape

Prospects in straw disintegration for biogas production

Misuse of null hypothesis significance testing: would estimation of positive and negative predictive values improve certainty of chemical risk assessment?

Predictive modeling of an azo metal complex dye sorption by pumpkin husk.

Note: steps taken to optimise probe specificity and signal intensity prior to field validation of the MIDTAL (Microarray for the Detection of Toxic Algae).

Accumulation, transformation, and release of inorganic arsenic by the freshwater cyanobacterium Microcystis aeruginosa.

Seasonal variations in cholinesterase activity, nerve conduction velocity and lung function among sprayers exposed to mixture of pesticides.

Evaluation of the groundwater quality feasibility zones for irrigational purposes through GIS in Omalur Taluk, Salem District, South India

Gridded inventories of historical usage for selected organochlorine pesticides in Gansu Province, China.

Assessment of DNA damage in Brazilian workers occupationally exposed to pesticides: a study from Central Brazil.

Assessment of Arthrobacter viscosus as reactive medium for forming permeable reactive biobarrier applied to PAHs remediation.

Mutagenicity and genotoxicity assessment of industrial wastewaters.

Preparation and characterization of magnetic $Fe_{3}O_{4}/CNT$ nanoparticles by RPO method to enhance the efficient removal of Cr(VI)

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Heavy metal levels in gonad and liver tissues-effects on the reproductive parameters of natural populations of Aphanius facsiatus.

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Electrocoagulation-integrated hybrid membrane processes for the treatment of tannery wastewater.

Seasonal variations of particle-associated nitrosamines by gas chromatography-mass spectrometry in the atmospheric environment of Zonguldak, Turkey.

The negative effects of cadmium on Bermuda grass growth might be offset by submergence.

Microarray testing for the presence of toxic algae monitoring programme in Galicia (NW Spain).

Quantitative and qualitative characteristics of dissolved organic matter from eight dominant aquatic macrophytes in Lake Dianchi, China.

Cadmium in blood of Tunisian men and risk of bladder cancer: interactions with arsenic exposure and smoking.

Effects of perchlorate on growth of four wetland plants and its accumulation in plant tissues.

Trace metals in flounder, Platichthys flesus (Linnaeus, 1758), and sediments from the Baltic Sea and the Portuguese Atlantic coast.

Heavy metal accumulation by poplar in calcareous soil with various degrees of multi-metal contamination: implications for phytoextraction and phytostabilization.

Efficiency of lipopeptide biosurfactants in removal of petroleum hydrocarbons and heavy metals from contaminated soil.

Biosorption of heavy metals from aqueous solution by UV-mutant Bacillus subtilis.

Growth dynamics of Chinese wingnut (Pterocarya stenoptera) seedlings and its effects on soil chemical properties under simulated water change in the Three Gorges Reservoir Region of Yangtze River.

Metal accumulation by submerged macrophytes in eutrophic lakes at the watershed scale.

Prospects for cultivating white mulberry (Morus alba) in the drawdown zone of the Three Gorges Reservoir, China.

Molecular tools for monitoring harmful algal blooms.

Occurrence and distribution of organic trace substances in waters from the Three Gorges Reservoir, China.

Whole cell hybridisation for monitoring harmful marine microalgae.

Processes and environmental quality in the Yangtze River system.

Conference report on the first meeting of French organic geochemists : Tuesday 30th-Friday 31st August 2012.

Predictive model for disinfection by-product in Alexandria drinking water, northern west of Egypt.

Immobilization of metal wastes by reaction with $H_{2}S$ in anoxic basins

Strengths and weaknesses of microarray approaches to detect Pseudo-nitzschia species in the field.

Shifts and stasis in marine HAB monitoring in New Zealand.

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Seasonal dynamics of harmful algae in outer Oslofjorden monitored by microarray, qPCR, and microscopy.

Content Provider	World Health Organization (WHO)-Global Index Medicus
Author	Eikrem, Wenche Hostyeva, Vladyslava Kegel, Jessica U. Egge, Elianne Sirnæs Edvardsen, Bente Dittami, Simon M.
Spatial Coverage	Norway
Description	Author Affiliation: Dittami SM ( Marine Biology, Department of Biology, University of Oslo, P.O. Box 1066, Blindern, 0316, Oslo, Norway, simon.dittami@gmail.com.)
Abstract	Monitoring of marine microalgae is important to predict and manage harmful algal blooms. Microarray Detection of Toxic ALgae (MIDTAL) is an FP7-funded EU project aiming to establish a multi-species microarray as a tool to aid monitoring agencies. We tested the suitability of different prototype versions of the MIDTAL microarray for the monthly monitoring of a sampling station in outer Oslofjorden during a 1-year period. Microarray data from two different versions of the MIDTAL chip were compared to results from cell counts (several species) and quantitative real-time PCR (qPCR; only Pseudochattonella spp.). While results from generation 2.5 microarrays exhibited a high number of false positive signals, generation 3.3 microarray data generally correlated with microscopy and qPCR data, with three important limitations: (1) Pseudo-nitzschia cells were not reliably detected, possibly because cells were not sufficiently retained during filtration or lysed during the extraction, and because of low sensitivity of the probes; (2) in the case of samples with high concentrations of non-target species, the sensitivity of the arrays was decreased; (3) one occurrence of Alexandrium pseudogonyaulax was not detected due to a 1-bp mismatch with the genus probe represented on the microarray. In spite of these shortcomings our data demonstrate the overall progress made and the potential of the MIDTAL array. The case of Pseudochattonella - where two morphologically similar species impossible to separate by light microscopy were distinguished - in particular, underlines the added value of molecular methods such as microarrays in routine phytoplankton monitoring.
ISSN	09441344
Issue Number	10
Volume Number	20
e-ISSN	16147499
Journal	Environmental Science and Pollution Research
Language	English
Publisher	Springer
Publisher Date	2013-10-01
Publisher Place	Germany
Access Restriction	One Nation One Subscription (ONOS)
Subject Keyword	Environmental Monitoring Methods Harmful Algal Bloom Microscopy Oligonucleotide Array Sequence Analysis Phytoplankton Genetics Real-time Polymerase Chain Reaction Diatoms Classification Dinoflagellida Microalgae Norway Seasons Water Pollution Statistics & Numerical Data Journal Article Research Support, Non-u.s. Gov't Discipline Environmental Science Discipline Environmental Chemistry
Content Type	Text
Resource Type	Article
Subject	Environmental Chemistry Health, Toxicology and Mutagenesis Pollution Medicine

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