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| Content Provider | World Health Organization (WHO)-Global Index Medicus |
|---|---|
| Author | Bai, Xiuhua Lai, Qiliang Dong, Chunming Li, Fuying Shao, Zongze |
| Spatial Coverage | Arctic Regions |
| Description | Country affiliation: China Author Affiliation: Bai X ( State Key Laboratory Breeding Base of Marine Genetic Resources, Xiamen, China.) |
| Abstract | A taxonomic study was carried out on strain D104(T), which was isolated from deep-sea subsurface sediment sample from the Arctic Ocean. The bacterium was found to be Gram-negative, oxidase negative and catalase weakly positive, rod shaped, motile by means of polar flagellum. The organism grows between 4 and 37 °C (optimum 25-28 °C) and 0.5-6 % NaCl (optimum 3 %). Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain D104(T) belongs to the genus Marinomonas, with highest sequence similarities of 97.7 % to Marinomonas ushuaiensis DSM 15871(T), followed by M. dokdonensis DSW10-10(T) (96.9 %), M. arenicola KMM 3893(T) (96.7 %), M. arctica 328(T) (96.6 %) and other 18 species of the genus Marinomonas (94.4-96.5 %). The average nucleotide identity and estimated DNA-DNA hybridization values between strain D104(T) and M. ushuaiensis DSM 15871(T) were 84.24 % and 20.80 ± 2.33 % respectively. The principal fatty acids were C16:0, sum in feature 3 (C16:1 ω7c/C16:1 ω6c), sum in feature 8 (C18:1 ω7c/C18:1 ω6c) and C12:1 3OH. The G + C content of the chromosomal DNA was determined to be 44.8 mol%. The respiratory quinone was found to be Q8 (100 %). Polar lipids include phosphatidylglycerol and phosphatidylethanolamine as major phospholipids and aminolipid and phospholipid as minor components. The results of the genotypic and phenotypic analyses indicate that strain D104(T) represents a novel species of the genus Marinomonas, for which the name Marinomonas profundimaris sp. nov. is proposed, with the type strain D104(T) (=MCCC 1A07573(T) = LMG 27696(T)). |
| File Format | HTM / HTML |
| ISSN | 00036072 |
| Issue Number | 3 |
| Volume Number | 106 |
| e-ISSN | 15729699 |
| Journal | Antonie van Leeuwenhoek |
| Language | English |
| Publisher | Springer |
| Publisher Date | 2014-09-01 |
| Publisher Place | Netherlands |
| Access Restriction | One Nation One Subscription (ONOS) |
| Subject Keyword | Discipline Microbiology Discipline Immunology Geologic Sediments Microbiology Marinomonas Classification Isolation & Purification Arctic Regions Bacterial Typing Techniques Base Composition Catalase Analysis Cluster Analysis Cytosol Chemistry Dna, Bacterial Genetics Dna, Ribosomal Fatty Acids Genome, Bacterial Locomotion Physiology Molecular Sequence Data Nucleic Acid Hybridization Oxidoreductases Phospholipids Phylogeny Quinones Rna, Ribosomal, 16s Sequence Analysis, Dna Sodium Chloride Metabolism Temperature Journal Article Research Support, Non-u.s. Gov't |
| Content Type | Text |
| Resource Type | Article |
| Subject | Medicine Molecular Biology Microbiology |
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