NDLI: In silico identification and comparative analysis of molybdenum (Mo) transporter genes in plants

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Brazilian Journal of Botany : Volume 38

Brazilian Journal of Botany : Volume 37

Brazilian Journal of Botany : Volume 36

In silico identification and comparative analysis of molybdenum (Mo) transporter genes in plants

Content Provider	Springer Nature Link
Author	Filiz, Ertugrul Vatansever, Recep Ozyigit, Ibrahim Ilker
Copyright Year	2015
Abstract	Molybdenum (Mo) is an essential micronutrient element required by plants at trace amounts. Studies of Mo transporters mainly refer to the general characteristics of sulfate transporters because of limited knowledge about these proteins. In this study, we have identified 39 potential Mo transporter-like genes from 17 plant species by homology search. We report that Mo transporter proteins could be characterized with their Sulfate_transp and/or SUL1 protein domain family, 7–10 putative TMDs, basic characteristics, and mainly single exon number. In addition, we have searched the highly conserved residues in identified Mo sequences. These conserved residues could be used as potential motif signatures in identification of Mo transporter sequences. Phylogenetic analysis demonstrated a clear distinction between lower and higher plants in Mo transporter sequences. Despite some structural variations, general topological features of Mo transporters in higher and lower plants are not much divergent among 17 species. Identification of Mo transporter genes/proteins in various plant species, and their comparative analysis will provide valuable theoretical knowledge for future studies of better characterization of Mo transporters.
Starting Page	87
Ending Page	99
Page Count	13
File Format	PDF
ISSN	01008404
Journal	Brazilian Journal of Botany
Volume Number	39
Issue Number	1
e-ISSN	18069959
Language	English
Publisher	Springer International Publishing
Publisher Date	2015-10-10
Publisher Place	Cham
Access Restriction	One Nation One Subscription (ONOS)
Subject Keyword	Plant Systematics/Taxonomy/Biogeography Molybdate Motif signature Transmembrane domain Conserved domain
Content Type	Text
Resource Type	Article
Subject	Plant Science

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