NDLI: Chloroplast microsatellite markers for the mangrove tree species Bruguiera gymnorrhiza, Kandelia candel, and Rhizophora stylosa, and cross-amplification in other mangrove species

Content Provider	Springer Nature Link
Author	Islam, Md. Sajedul Lian, Chunlan Geng, Qifang Kameyama, rikazu Hogetsu, Taizo
Copyright Year	2007
Abstract	Chloroplast microsatellite (cpSSR) markers were developed for three ecologically and economically important tree species in the mangrove family, Rhizophoraceae: Bruguiera gymnorrhiza, Kandelia candel, and Rhizophora stylosa. Noncoding regions of chloroplast DNA (cpDNA) from each species were separately amplified using universal chloroplast primers. Six, two, and three polymorphic cpSSR loci in B. gymnorrhiza, K. candel, and R. stylosa, respectively, were developed from amplified noncoding cpDNA regions. Characterization of 216, 156, and 253 individuals of B. gymnorrhiza, K. candel, and R. stylosa, respectively, collected from different natural mangrove populations (B. gymnorrhiza, 9; K. candel, 7; R. stylosa, 9) on Iriomote Island in Japan showed that these loci provide cpSSR markers with polymorphisms ranging from two to four alleles per locus and gene diversity between 0.027 and 0.480. These cpSSR markers will be useful for analyzing the maternal lineage distributions and population genetic structures of the three species. Several of these markers may also be useful in similar studies of other mangrove species.
Starting Page	989
Ending Page	993
Page Count	5
File Format	PDF
ISSN	15660621
Journal	Conservation Genetics
Volume Number	9
Issue Number	4
e-ISSN	15729737
Language	English
Publisher	Springer Netherlands
Publisher Date	2007-09-22
Publisher Place	Dordrecht
Access Restriction	One Nation One Subscription (ONOS)
Subject Keyword	cpSSR Mangrove Maternal lineage Rhizophoraceae Evolutionary Biology Plant Sciences Animal Anatomy / Morphology / Histology Human Genetics
Content Type	Text
Resource Type	Article
Subject	Genetics Ecology, Evolution, Behavior and Systematics

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