NDLI: Novosphingobium aquaticum sp. nov., isolated from lake water in Suwon, Republic of Korea

Content Provider	Springer Nature Link
Author	Singh, Hina Du, Juan Yang, Jung Eun Yin, ChangShik Kook, MooChang Yi, Tae Hoo
Copyright Year	2015
Abstract	A novel Gram-stain negative, yellow coloured, strictly aerobic, rod-shaped, non-motile bacterium designated as THW-SA1T, was isolated from lake water near Samsung apartment, Suwon, Republic of Korea. The phylogenetic analysis based on 16S rRNA gene sequences showed that strain THW-SA1T belongs to the genus Novosphingobium and is closely related to Novosphingobium taihuense (97.8 %) and Novosphingobium subterraneum (97.1 %). The DNA–DNA relatedness values between strain THW-SA1T and the most closely related type strains were found to be less than 30.0 %. The DNA G+C content was determined to be 67.5 mol%. The strain grows optimally at 25–28 °C, at pH 7.0, and in the presence of 0.5 % NaCl. The predominant isoprenoid quinone was identified as ubiquinone Q-10. The polar lipid profile comprises diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidyldimethylethanolamine, sphingoglycolipid, phosphatidylcholine, some unidentified phospholipids and some unidentified polar lipids. Fatty acids characteristic for this genus, such as C16:1, C14:0 2-OH, C16:1 ω6c and/or C16:1 ω7c (summed feature 3) and C18:1 ω6c and/or C18:1 ω7c (summed feature 8) were also detected. On the basis of the phenotypic and genotypic analysis, the strain THW-SA1T is considered to represent a novel species of the genus Novosphingobium, for which the name Novosphingobium aquaticum sp. nov. is proposed. The type strain is THW-SA1T (=KCTC 42608T=CCTCC AB 2015114T).
Starting Page	851
Ending Page	858
Page Count	8
File Format	PDF
ISSN	00036072
Journal	Antonie van Leeuwenhoek
Volume Number	108
Issue Number	4
e-ISSN	15729699
Language	English
Publisher	Springer International Publishing
Publisher Date	2015-07-24
Publisher Place	Cham
Access Restriction	One Nation One Subscription (ONOS)
Subject Keyword	Novosphingobium aquaticum Ubiquinone Q-10 Gram-stain negative 16S rRNA Microbiology Medical Microbiology Plant Sciences Soil Science & Conservation
Content Type	Text
Resource Type	Article
Subject	Medicine Molecular Biology Microbiology

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