Loading...
Please wait, while we are loading the content...
Similar Documents
A 7 高並列計算機によるRNAの 2 次 構造予測 RNA Secondary Structure Prediction
| Content Provider | Semantic Scholar |
|---|---|
| Author | Takeda, Yoshisato Yasugi, Masahiro Yonezawa, Akinori |
| Copyright Year | 2011 |
| Abstract | An RNA secondary structure prediction method using a highly parallel computer is reported. We focus on finding thermodynamically stable structures of a single-stranded RNA molecule. Our approach is based on a parallel combinatorial method which calculates the free energy of a molecule as the sum of the free energies of all the possible hydrogen bonds. Most of the conventional prediction methods find only the most stable structure. In contrast, our parallel algorithm finds many highly stable structures at once. The important idea in our algorithm is search-order scheduling. This scheduling helps us find highly stable RNA structures faster, and reduce unnecessary computation. |
| File Format | PDF HTM / HTML |
| Alternate Webpage(s) | https://www.jstage.jst.go.jp/article/gi1990/3/0/3_0_45/_pdf/-char/en |
| Language | English |
| Access Restriction | Open |
| Content Type | Text |
| Resource Type | Article |
