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Nonomuraea syzygii sp. nov., an endophytic actinomycete isolated from the roots of a jambolan plum tree (Syzygium cumini L. Skeels).
| Content Provider | Semantic Scholar |
|---|---|
| Author | Rachniyom, Hathairat Matsumoto, Atsuko Indananda, Chantra Duangmal, Kannika Takahashi, Yōko Thamchaipenet, Arinthip |
| Copyright Year | 2015 |
| Abstract | A novel endophytic actinomycete, designated strain GKU 164(T), was isolated from the roots of a jambolan plum tree (Syzygium cumini L. Skeels), collected at Khao Khitchakut National Park, Chantaburi province, Thailand. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the strain formed a distinct clade within the genus Nonomuraea , and was most closely related to Nonomuraea monospora PT708(T) (98.77% 16S rRNA gene sequence similarity) and Nonomuraea thailandensis KC-061(T) (98.73%). Strain GKU 164(T) formed a branched substrate and aerial hyphae that generated single spores with rough surfaces. The cell wall contained meso-diaminopimelic acid. The whole-cell sugars were madurose, galactose, mannose, ribose, rhamnose and glucose. The N-acyl type of muramic acid was acetyl. The predominant menaquinone was MK-9(H4) with minor amounts of MK-9(H6), MK-9(H2) and MK-9(H0). The phospholipid profile contained diphosphatidylglycerol, phosphatidylethanolamine, hydroxy-phosphatidylethanolamine, phosphatidylglycerol, phosphatidylinositol, phosphatidylinositolmannosides, phosphatidylmonomethylethanolamine, hydroxy-phosphatidylmonomethylethanolamine, an unidentified aminophosphoglycolipid and four unknown phospholipids. The major fatty acids were iso-C(16 : 0) and 10-methyl C(17 : 0). The genomic DNA G+C content was 70.4 mol%. Significant differences in the morphological, chemotaxonomical, and biochemical data together with DNA-DNA relatedness values between strain GKU 164(T) and type strains of closely related species, clearly demonstrated that strain GKU 164(T) represents a novel species of the genus Nonomuraea , for which the name Nonomuraea syzygii sp. nov. is proposed. The type strain is GKU 164(T) ( = BCC 70457(T) = NBRC 110400(T)). |
| File Format | PDF HTM / HTML |
| DOI | 10.1099/ijs.0.000085 |
| Alternate Webpage(s) | https://www.microbiologyresearch.org/docserver/fulltext/ijsem/65/4/1234_ijs000085.pdf?accname=guest&checksum=693E072FE2F9E9A4E233BBFC9B8A5701&expires=1553722457&id=id |
| Alternate Webpage(s) | http://www.microbiologyresearch.org/docserver/fulltext/ijsem/65/4/1234_ijs000085.pdf?accname=guest&checksum=77D3336D583695E894EC85595597CA8C&expires=1541775919&id=id |
| Alternate Webpage(s) | https://www.microbiologyresearch.org/docserver/fulltext/ijsem/65/4/1234_ijs000085.pdf?accname=guest&checksum=1B75F1402CED5D4ED086DC1D96E3DA86&expires=1552862303&id=id |
| Alternate Webpage(s) | http://www.microbiologyresearch.org/docserver/fulltext/ijsem/65/4/1234_ijs000085.pdf?accname=guest&checksum=8608C44750B05106593239A74FB8B5AC&expires=1541183238&id=id |
| Alternate Webpage(s) | https://www.microbiologyresearch.org/docserver/fulltext/ijsem/65/4/1234_ijs000085.pdf?accname=guest&checksum=D0A43059565B7CBBD1CDBD9287D09CB2&expires=1545438547&id=id |
| PubMed reference number | 25634947 |
| Alternate Webpage(s) | https://doi.org/10.1099/ijs.0.000085 |
| Volume Number | 65 |
| Part | 4 |
| Journal | International journal of systematic and evolutionary microbiology |
| Language | English |
| Access Restriction | Open |
| Content Type | Text |
| Resource Type | Article |
