NDLI: The complete chloroplast genome sequence of <i>Annamocarya sinensis</i> (Juglandaceae), an Endangered species endemic to Yunnan Province, China.

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The complete chloroplast genome sequence of Annamocarya sinensis (Juglandaceae), an Endangered species endemic to Yunnan Province, China.

Content Provider	Europe PMC
Author	Ji, Yuman Zhang, Wanjie Li, Dan Shen, Lixin
Copyright Year	2020
Abstract	AbstractAnnamocarya sinensis, a plant species with extremely small populations endemic to Xichou county of Yunnan province, has been classified as a national second-class protected wild plant. In this study, we assembled its complete chloroplast genome. The total genome size of A. sinensis was 158,484 bp in length, containing a large single-copy region of 89,871 bp, a small single-copy region of 20,558 bp, and a pair of inverted repeat regions of 24,029 bp. The all GC content of A. sinensis chloroplast genome was 36.2%. It encodes a total of 114 unique genes, including 79 protein-coding genes, 31 tRNA genes, and four rRNA genes. Eleven genes contain a single intron, and three genes have two introns. Phylogenetic analysis results strongly supported that Annamocarya sinensis was closely related to Carya kweichowensis.
Page Count	3
Volume Number	5
PubMed Central reference number	PMC7782989
Issue Number	3
PubMed reference number	33457728
Journal	Mitochondrial DNA. Part B, Resources [Mitochondrial DNA B Resour]
e-ISSN	23802359
DOI	10.1080/23802359.2020.1756477
Language	English
Publisher	Taylor & Francis
Publisher Date	2020-05-12
Access Restriction	Open
Rights License	This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.
Subject Keyword	Annamocarya sinensis Endangered species chloroplast genome phylogenetic analysis
Content Type	Text
Resource Type	Article
Subject	Genetics Molecular Biology

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