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| Content Provider | World Health Organization (WHO)-Global Index Medicus |
|---|---|
| Author | Xavier, Daniela Vázquez, Sara Higuera, Clara Morán, Federico Montero, Francisco |
| Description | Country affiliation: Spain Author Affiliation: Xavier D ( Departamento de Bioquímica y Biología Molecular I, Universidad Complutense Madrid, Avd. Complutense s/n, 28040 Madrid, Spain.) |
| Abstract | Tools-4-Metatool (T4M) is a suite of web-tools, implemented in PERL, which analyses, parses, and manipulates files related to Metatool. Its main goal is to assist the work with Metatool. T4M has two major sets of tools: Analysis and Compare. Analysis visualizes the results of Metatool (convex basis, elementary flux modes, and enzyme subsets) and facilitates the study of metabolic networks. It is composed of five tools: MDigraph, MetaMatrix, CBGraph, EMGraph, and SortEM. Compare was developed to compare different Metatool results from different networks. This set consists of: Compara and ComparaSub which compare network subsets providing outputs in different formats and ComparaEM that seeks for identical elementary modes in two metabolic networks. The suite T4M also includes one script that generates Metatool input: CBasis2Metatool, based on a Metatool output file that is filtered by a list of convex basis' metabolites. Finally, the utility CheckMIn checks the consistency of the Metatool input file. T4M is available at http://solea.quim.ucm.es/t4m. |
| File Format | HTM / HTML |
| ISSN | 03032647 |
| Issue Number | 2 |
| Volume Number | 105 |
| e-ISSN | 18728324 |
| Journal | Biosystems |
| Language | English |
| Publisher | Elsevier |
| Publisher Date | 2011-08-01 |
| Publisher Place | Ireland |
| Access Restriction | One Nation One Subscription (ONOS) |
| Subject Keyword | Discipline Computational Biology Buchnera Metabolism Metabolic Networks And Pathways Software Systems Biology Methods Valine Biosynthesis Algorithms Computer Simulation Genome Models, Biological Evaluation Studies Journal Article Research Support, Non-u.s. Gov't |
| Content Type | Text |
| Resource Type | Article |
| Subject | Applied Mathematics Statistics and Probability Medicine Biochemistry, Genetics and Molecular Biology Modeling and Simulation |
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