NDLI: Comparing activated sludge fungal community population diversity using denaturing gradient gel electrophoresis and terminal restriction fragment length polymorphism.

Please wait, while we are loading the content...

Chryseobacterium zeae sp. nov., Chryseobacterium arachidis sp. nov., and Chryseobacterium geocarposphaerae sp. nov. isolated from the rhizosphere environment.

Algoriphagus boseongensis sp. nov., a member of the family Cyclobacteriaceae isolated from a tidal flat.

Ruegeria meonggei sp. nov., an alphaproteobacterium isolated from ascidian Halocynthia roretzi.

Roseovarius azorensis sp. nov., isolated from seawater at Espalamaca, Azores

Utilization of (15)N-labelled yeast hydrolysate in Lactococcus lactis IL1403 culture indicates co-consumption of peptide-bound and free amino acids with simultaneous efflux of free amino acids.

Identification of indigenous yeast flora isolated from the five winegrape varieties harvested in Xiangning, China.

Comparing activated sludge fungal community population diversity using denaturing gradient gel electrophoresis and terminal restriction fragment length polymorphism.

Leucosporidium escuderoi f.a., sp. nov., a basidiomycetous yeast associated with an Antarctic marine sponge.

Halorubrum halophilum sp. nov., an extremely halophilic archaeon isolated from a salt-fermented seafood

Identification of a proton-chloride antiporter (EriC) by Himar1 transposon mutagenesis in Lactobacillus reuteri and its role in histamine production.

Year: 2014 Volume: 105 Issue: 2

Year: 2014 Volume: 105 Issue: 1

Year: 2013 Volume: 104

Year: 2013 Volume: 103

Year: 2012 Volume: 102

Year: 2012 Volume: 101

Year: 2011 Volume: 100

Year: 2011 Volume: 99

Year: 2010 Volume: 98

Year: 2010 Volume: 97

Year: 2009 Volume: 96

Year: 2009 Volume: 95

Year: 2008 Volume: 94

Comparing activated sludge fungal community population diversity using denaturing gradient gel electrophoresis and terminal restriction fragment length polymorphism.

Content Provider	World Health Organization (WHO)-Global Index Medicus
Author	Evans, Tegan N. Watson, Garth Rees, Gavin N. Seviour, Robert J.
Description	Author Affiliation: Evans TN ( La Trobe Institute for Molecular Sciences, La Trobe University, Bundoora, VIC, 3086, Australia, tnevans1984@gmail.com.)
Abstract	We compared the relative values of denaturing gradient gel electrophoresis (DGGE) and terminal restriction fragment length polymorphism (T-RFLP) for profiling fungal communities in wastewater treatment plants using both ITS and 18S rRNA gene fragments as phylogenetic markers. A similar number of fungal ribotypes was obtained with both methods for the same treatment plant when the ITS primer set was used, while a greater number of ribotypes was obtained with T-RFLP compared to DGGE with the 18S rRNA primer set. Non-metric multi-dimensional scaling of presence/absence data and analysis of similarity showed that both methods could distinguish between the different plant communities at a statistically significant level (p < 0.05), regardless of which phylogenetic marker was used. The data suggest that both methods can be used preferably together to profile activated sludge fungal communities. A comparison of profiles generated with both these phylogenetic markers based on the number of ribotypes/bands, suggests that the 18S rRNA region is more discriminatory than the ITS region. Detected differences in fungal community compositions between plants probably reflect differences in their influent compositions and operational parameters.
File Format	HTM / HTML
ISSN	00036072
Issue Number	3
Volume Number	105
e-ISSN	15729699
Journal	Antonie van Leeuwenhoek
Language	English
Publisher	Springer
Publisher Date	2014-03-01
Publisher Place	Netherlands
Access Restriction	One Nation One Subscription (ONOS)
Subject Keyword	Discipline Microbiology Discipline Immunology Biodiversity Fungi Classification Sewage Microbiology Dna, Ribosomal Spacer Genetics Denaturing Gradient Gel Electrophoresis Polymorphism, Restriction Fragment Length Rna, Ribosomal, 18s Journal Article
Content Type	Text
Resource Type	Article
Subject	Medicine Molecular Biology Microbiology

Sl.	Authority	Responsibilities	Communication Details
1	Ministry of Education (GoI), Department of Higher Education	Sanctioning Authority	https://www.education.gov.in/ict-initiatives
2	Indian Institute of Technology Kharagpur	Host Institute of the Project: The host institute of the project is responsible for providing infrastructure support and hosting the project	https://www.iitkgp.ac.in
3	National Digital Library of India Office, Indian Institute of Technology Kharagpur	The administrative and infrastructural headquarters of the project	Dr. B. Sutradhar bsutra@ndl.gov.in
4	Project PI / Joint PI	Principal Investigator and Joint Principal Investigators of the project	Dr. B. Sutradhar bsutra@ndl.gov.in Prof. Saswat Chakrabarti will be added soon
5	Website/Portal (Helpdesk)	Queries regarding NDLI and its services	support@ndl.gov.in
6	Contents and Copyright Issues	Queries related to content curation and copyright issues	content@ndl.gov.in
7	National Digital Library of India Club (NDLI Club)	Queries related to NDLI Club formation, support, user awareness program, seminar/symposium, collaboration, social media, promotion, and outreach	clubsupport@ndl.gov.in
8	Digital Preservation Centre (DPC)	Assistance with digitizing and archiving copyright-free printed books	dpc@ndl.gov.in
9	IDR Setup or Support	Queries related to establishment and support of Institutional Digital Repository (IDR) and IDR workshops	idr@ndl.gov.in

Comparing activated sludge fungal community population diversity using denaturing gradient gel electrophoresis and terminal restriction fragment length polymorphism

Determination of microbial diversity in meju, fermented cooked soya beans, using nested PCR-denaturing gradient gel electrophoresis.

Diversity and activities of yeasts from different parts of a Stilton cheese.

Effects of Cd- and Zn-enriched sewage sludge on soil bacterial and fungal communities.

Diversity and dynamics of Archaea in an activated sludge wastewater treatment plant

Comparison of ITS and 18S rDNA for estimating fungal diversity using PCR-DGGE.

Biases for detecting arbuscular mycorrhizal fungal mixture by terminal restriction fragment length polymorphism (T-RFLP).

Unique sequence characteristics account for good DGGE separation of almost full-length 18S rDNAs.

Comparison of ITS and 18S rDNA for estimating fungal diversity using PCR–DGGE

Comparing activated sludge fungal community population diversity using denaturing gradient gel electrophoresis and terminal restriction fragment length polymorphism.

Similar Documents

Comparing activated sludge fungal community population diversity using denaturing gradient gel electrophoresis and terminal restriction fragment length polymorphism

Determination of microbial diversity in meju, fermented cooked soya beans, using nested PCR-denaturing gradient gel electrophoresis.

Diversity and activities of yeasts from different parts of a Stilton cheese.

Effects of Cd- and Zn-enriched sewage sludge on soil bacterial and fungal communities.

Diversity and dynamics of Archaea in an activated sludge wastewater treatment plant

Comparison of ITS and 18S rDNA for estimating fungal diversity using PCR-DGGE.

Biases for detecting arbuscular mycorrhizal fungal mixture by terminal restriction fragment length polymorphism (T-RFLP).

Unique sequence characteristics account for good DGGE separation of almost full-length 18S rDNAs.

Comparison of ITS and 18S rDNA for estimating fungal diversity using PCR–DGGE

Comparing activated sludge fungal community population diversity using denaturing gradient gel electrophoresis and terminal restriction fragment length polymorphism.