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| Content Provider | World Health Organization (WHO)-Global Index Medicus |
|---|---|
| Author | Ravela, Jaideep Betts, Bradley J. Brun-Vézinet, Francoise Vandamme, Anne-Mieke Descamps, Diane Van Laethem, Kristel Smith, Kate Schapiro, Jonathan M. Winslow, Dean L. Reid, Caroline Shafer, Robert W. |
| Description | Country affiliation: United States Author Affiliation: Ravela J ( Division of Infectious Diseases, Department of Medicine, Stanford University, Stanford, California 94301, USA.) |
| Abstract | Several rules-based algorithms have been developed to interpret results of HIV-1 genotypic resistance tests. To assess the concordance of these algorithms and to identify sequences causing interalgorithm discordances, we applied four publicly available algorithms to the sequences of isolates from 2,045 individuals in northern California. Drug resistance interpretations were classified as S for susceptible, I for intermediate, and R for resistant. Of 30,675 interpretations (2,045 sequences x 15 drugs), 4.4% were completely discordant, with at least one algorithm assigning an S and another an R; 29.2% were partially discordant, with at least one algorithm assigning an S and another an I, or at least one algorithm assigning an I and another an R; and 66.4% displayed complete concordance, with all four algorithms assigning the same interpretation. Discordances between nucleoside reverse transcriptase inhibitor interpretations usually resulted from several simple, frequently occurring mutational patterns. Discordances between protease inhibitor interpretations resulted from a larger number of more complex mutation patterns. Discordances between nonnucleoside reverse transcriptase inhibitor interpretations were uncommon and resulted from a small number of individual drug resistance mutations. Determining the clinical significance of these mutation patterns responsible for interalgorithm discordances will improve interalgorithm concordance and the accuracy of genotypic resistance interpretation. |
| File Format | HTM / HTML |
| ISSN | 15254135 |
| e-ISSN | 10779450 |
| Journal | JAIDS Journal of Acquired Immune Deficiency Syndromes |
| Issue Number | 1 |
| Volume Number | 33 |
| Language | English |
| Publisher | Lippincott Williams & Wilkins |
| Publisher Date | 2003-05-01 |
| Publisher Place | United States |
| Access Restriction | Open |
| Subject Keyword | Discipline AIDS Algorithms Anti-hiv Agents Pharmacology Drug Resistance, Multiple, Viral Genetics Hiv Protease Hiv Reverse Transcriptase Hiv-1 Drug Effects Mutation Amino Acid Sequence Genotype Hiv Infections Drug Therapy Virology Research Support, Non-u.s. Gov't |
| Content Type | Text |
| Resource Type | Article |
| Subject | Infectious Diseases Pharmacology (medical) |
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