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| Content Provider | Taylor & Francis Online |
|---|---|
| Author | Kim, Namgu Phan, Brian Choi, Dongseok Machida, Curtis A. Strauss, Shay Joseph, Raphael George, Noelle Kawasaki, Kellie Kohli, Richie Baumgartner, J. Craig Flamiatos, Erin Maier, Tom Carriere, Charles Sedgley, Christine |
| Abstract | Background and objectivesAcute apical abscesses are serious endodontic diseases resulting from pulpal infection with opportunistic oral microorganisms. The objective of this study was to identify and compare the oral microbiota in patients (N=18) exhibiting acute apical abscesses, originating from the demographic region in Portland, Oregon. The study hypothesis is that abscesses obtained from this demographic region may contain unique microorganisms not identified in specimens from other regions.DesignEndodontic abscesses were sampled from patients at the Oregon Health & Science University (OHSU) School of Dentistry. DNA from abscess specimens was subjected to polymerase chain reaction amplification using 16S rRNA gene-specific primers and Cy3-dCTP labeling. Labeled DNA was then applied to microbial microarrays (280 species) generated by the Human Oral Microbial Identification Microarray Laboratory (Forsyth Institute, Cambridge, MA).ResultsThe most prevalent microorganisms, found across multiple abscess specimens, include Fusobacterium nucleatum, Parvimonas micra, Megasphaera species clone CS025, Prevotella multisaccharivorax, Atopobium rimae, and Porphyromonas endodontalis. The most abundant microorganisms, found in highest numbers within individual abscesses, include F. nucleatum, P. micra, Streptococcus Cluster III, Solobacterium moorei, Streptococcus constellatus, and Porphyromonas endodontalis. Strong bacterial associations were identified between Prevotella multisaccharivorax, Acidaminococcaceae species clone DM071, Megasphaera species clone CS025, Actinomyces species clone EP053, and Streptococcus cristatus (all with Spearman coefficients >0.9).ConclusionsCultivable and uncultivable bacterial species have been identified in endodontic abscesses obtained from the Portland, Oregon demographic region, and taxa identifications correlated well with other published studies, with the exception of Treponema and Streptococcus cristae, which were not commonly identified in endodontic abscesses between the demographic region in Portland, Oregon and other regions. |
| File Format | PDF HTM / HTML |
| ISSN | 20002297 |
| DOI | 10.3402/jom.v8.30989 |
| Journal | Journal of Oral Microbiology |
| Volume Number | 8 |
| Issue Number | 1 |
| Language | English |
| Publisher | Taylor & Francis |
| Publisher Date | 2016-03-15 |
| Access Restriction | Open |
| Subject Keyword | Endodontic abscesses Oral microbiota Human oral microbial identification microarrays Anaerobic oral microorganisms Fusobacterium nucleatum Streptococcus cristatus |
| Content Type | Text |
| Resource Type | Article |
| Subject | Microbiology (medical) Dentistry Infectious Diseases 3500/3501 |
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