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| Content Provider | Springer Nature : BioMed Central |
|---|---|
| Author | Bosma, Elleke F. Koehorst, Jasper J. van Hijum, Sacha A. F. T. Renckens, Bernadet Vriesendorp, Bastienne van de Weijer, Antonius H. P. Schaap, Peter J. de Vos, Willem M. van der Oost, John van Kranenburg, Richard |
| Abstract | Bacillus smithii is a facultatively anaerobic, thermophilic bacterium able to use a variety of sugars that can be derived from lignocellulosic feedstocks. Being genetically accessible, it is a potential new host for biotechnological production of green chemicals from renewable resources. We determined the complete genomic sequence of the B. smithii type strain DSM 4216T, which consists of a 3,368,778 bp chromosome (GenBank accession number CP012024.1) and a 12,514 bp plasmid (GenBank accession number CP012025.1), together encoding 3880 genes. Genome annotation via RAST was complemented by a protein domain analysis. Some unique features of B. smithii central metabolism in comparison to related organisms included the lack of a standard acetate production pathway with no apparent pyruvate formate lyase, phosphotransacetylase, and acetate kinase genes, while acetate was the second fermentation product. |
| Related Links | https://environmentalmicrobiome.biomedcentral.com/counter/pdf/10.1186/s40793-016-0172-8.pdf |
| Ending Page | 11 |
| Page Count | 11 |
| Starting Page | 1 |
| File Format | HTM / HTML |
| ISSN | 25246372 |
| DOI | 10.1186/s40793-016-0172-8 |
| Journal | Environmental Microbiome |
| Issue Number | 1 |
| Volume Number | 11 |
| Language | English |
| Publisher | BioMed Central |
| Publisher Date | 2016-08-24 |
| Access Restriction | Open |
| Subject Keyword | Microbial Genetics and Genomics Plant Genetics and Genomics Animal Genetics and Genomics Bacillus smithii Genome sequence Lactic acid Thermophile Thermophilic bacillus Biotechnology |
| Content Type | Text |
| Resource Type | Article |
| Subject | Genetics Microbiology Applied Microbiology and Biotechnology |
| Journal Impact Factor | 6.3/2023 |
| 5-Year Journal Impact Factor | 7.1/2023 |
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