NDLI: Phylogenetic analysis of noxious red tide flagellates Chattonella antiqua, C. marina, C. ovata, and C. verruculosa (Raphidophyceae) based on the rRNA gene family

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Fisheries Science : Volume 72, Issue 5, September 2006

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Fisheries Science : Volume 72, Issue 1, January 2006

Fisheries Science : Volume 71

Phylogenetic analysis of noxious red tide flagellates Chattonella antiqua, C. marina, C. ovata, and C. verruculosa (Raphidophyceae) based on the rRNA gene family

Content Provider	Springer Nature Link
Author	Hosoi Tanabe, Shoko Otake, Isamu Sako, Yoshihiko
Copyright Year	2006
Abstract	Four species of Chattonella, which are well known to form red tides that are lethal to fish, were subjected to phylogenetic analysis on the basis of the ribosomal RNA genes (rDNA), 5.8S rDNA, 18S rDNA, 28S rDNA, and the flanking internal transcribed spacers 1 and 2 (ITS1 and ITS2). The 18S rDNA sequences of C. antiqua, C. marina, and C. ovata isolated from different regions in Japan were compared. They were found to be identical with each other in a sequence 1818 bp long. The sequences of the D1/D2 region in the 28S rDNA, 5.8S rDNA, and ITS region that are known to be more variable regions were also found to be identical. These homogeneities of the rRNA gene family revealed the extremely close relatedness of C. antiqua, C. marina, and C. ovata. The sequences of C. verruculosa were different from those of these three species, resulting in an 89.2% homology in the 18S rDNA sequences, 70.4% homology in the D1/D2 region in the 28S rDNA sequences, and an 81.5% homology in 5.8S rDNA sequences and the ITS regions. Chattonella verruculosa was grouped within a single cluster composed of Dictyochophyceae rather than the other species of Raphidophyceae.
Starting Page	1200
Ending Page	1208
Page Count	9
File Format	PDF
ISSN	09199268
Journal	Fisheries Science
Volume Number	72
Issue Number	6
e-ISSN	14442906
Language	English
Publisher	Springer-Verlag
Publisher Date	2006-01-01
Publisher Place	Tokyo
Access Restriction	One Nation One Subscription (ONOS)
Subject Keyword	Chattonella genetic homogeneity phylogenetic analysis Raphidophyceae rRNA gene family Fish & Wildlife Biology & Management Freshwater & Marine Ecology Food Science
Content Type	Text
Resource Type	Article
Subject	Aquatic Science

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Phylogenetic analysis of noxious red tide flagellates Chattonella antiqua, C. marina, C. ovata, and C. verruculosa (Raphidophyceae) based on the rRNA gene family

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Development of microsatellite markers for the red tide-forming harmful speciesChattonella antiqua,C. marina, andC. ovata(Raphidophyceae)

Response of Chattonella marina (Raphidophyceae) and marine plankton to yellow clay and thiazolidinedione derivative TD49 in a mesocosm enclosure

Encystment of the red tide flagellate Chattonella antiqua ( Raphidophyceae ) : cyst yield in batch cultures and cyst flux in the field

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Hemolytic Activity in Relation to the Photosynthetic System in Chattonella marina and Chattonella ovata

Phylogenetic analysis of noxious red tide flagellates Chattonella antiqua, C. marina, C. ovata, and C. verruculosa (Raphidophyceae) based on the rRNA gene family

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