NDLI: Comparison and confirmation of SNP-bud burst associations in European beech populations in Germany

Content Provider	Springer Nature Link
Author	Müller, Markus Seifert, Sarah Finkeldey, Reiner
Copyright Year	2017
Abstract	European beech (Fagus sylvatica L.) is one of the most important forest tree species in Central Europe. Climate change scenarios predict an increase in annual mean temperatures that may cause earlier bud burst in spring, potentially leading to an increased late frost-risk. Despite the ecologic and economic importance of beech, knowledge about the molecular basis of bud burst is still scarce in this species. Here, an association analysis was used to detect SNPs that are significantly associated with beech bud burst. A translocation experiment was established with progenies of six different beech populations from three widely separated regions in Northeast, Central, and Southwest Germany. In total, 600 individuals of the translocation experiment were genotyped using a set of 46 SNPs located in bud burst candidate genes. The association analysis revealed seven SNPs significantly associated with bud burst, each SNP explaining only a few percent of the observed phenotypic variation. Since the same SNP set was used in a previous association analysis with European beech, we were able to compare and confirm significant associations between SNPs and bud burst in distinct beech populations growing in different environments.
Starting Page	1
Ending Page	12
Page Count	12
File Format	PDF
ISSN	16142942
Journal	Tree Genetics & Genomes
Volume Number	13
Issue Number	3
e-ISSN	16142950
Language	English
Publisher	Springer Berlin Heidelberg
Publisher Date	2017-05-05
Publisher Place	Berlin, Heidelberg
Access Restriction	One Nation One Subscription (ONOS)
Subject Keyword	European beech Bud burst Association Climate change Forestry Plant Genetics & Genomics Plant Breeding/Biotechnology Tree Biology Biotechnology
Content Type	Text
Resource Type	Article
Subject	Genetics Molecular Biology Horticulture Forestry

Sl.	Authority	Responsibilities	Communication Details
1	Ministry of Education (GoI), Department of Higher Education	Sanctioning Authority	https://www.education.gov.in/ict-initiatives
2	Indian Institute of Technology Kharagpur	Host Institute of the Project: The host institute of the project is responsible for providing infrastructure support and hosting the project	https://www.iitkgp.ac.in
3	National Digital Library of India Office, Indian Institute of Technology Kharagpur	The administrative and infrastructural headquarters of the project	Dr. B. Sutradhar bsutra@ndl.gov.in
4	Project PI / Joint PI	Principal Investigator and Joint Principal Investigators of the project	Dr. B. Sutradhar bsutra@ndl.gov.in Prof. Saswat Chakrabarti will be added soon
5	Website/Portal (Helpdesk)	Queries regarding NDLI and its services	support@ndl.gov.in
6	Contents and Copyright Issues	Queries related to content curation and copyright issues	content@ndl.gov.in
7	National Digital Library of India Club (NDLI Club)	Queries related to NDLI Club formation, support, user awareness program, seminar/symposium, collaboration, social media, promotion, and outreach	clubsupport@ndl.gov.in
8	Digital Preservation Centre (DPC)	Assistance with digitizing and archiving copyright-free printed books	dpc@ndl.gov.in
9	IDR Setup or Support	Queries related to establishment and support of Institutional Digital Repository (IDR) and IDR workshops	idr@ndl.gov.in

A candidate gene-based association study reveals SNPs significantly associated with bud burst in European beech (Fagus sylvatica L.)

The use of genetic correlations to evaluate associations between SNP markers and quantitative traits

Forest ecosystem genomics and adaptation: EVOLTREE conference report

Climate change risk management in tree improvement programs: selection and movement of genotypes

Analysis of gene expression during bud burst initiation in Norway spruce via ESTs from subtracted cDNA libraries

Alpine forest genomics network (AForGeN): a report of the first annual meeting

Range shift and loss of genetic diversity under climate change in Caryocar brasiliense, a Neotropical tree species

Characterising a Eucalyptus cladocalyx breeding population using SNP markers

TreeSNPs: a laboratory information management system (LIMS) dedicated to SNP discovery in trees

Comparison and confirmation of SNP-bud burst associations in European beech populations in Germany

Similar Documents

A candidate gene-based association study reveals SNPs significantly associated with bud burst in European beech (Fagus sylvatica L.)

The use of genetic correlations to evaluate associations between SNP markers and quantitative traits

Forest ecosystem genomics and adaptation: EVOLTREE conference report

Climate change risk management in tree improvement programs: selection and movement of genotypes

Analysis of gene expression during bud burst initiation in Norway spruce via ESTs from subtracted cDNA libraries

Alpine forest genomics network (AForGeN): a report of the first annual meeting

Range shift and loss of genetic diversity under climate change in Caryocar brasiliense, a Neotropical tree species

Characterising a Eucalyptus cladocalyx breeding population using SNP markers

TreeSNPs: a laboratory information management system (LIMS) dedicated to SNP discovery in trees

Comparison and confirmation of SNP-bud burst associations in European beech populations in Germany