NDLI: Genetic variability and evolutionary analyses of the coat protein gene of Tomato mosaic virus

Content Provider	Springer Nature Link
Author	Rangel, E. A. Alfaro Fernández, A. Font San Ambrosio, M. I. Luis Arteaga, M. Rubio, L.
Copyright Year	2011
Abstract	Tomato mosaic virus (ToMV), a member of the genus Tobamovirus, infects several ornamental and horticultural crops worldwide. In this study, the nucleotide sequences of the coat protein gene of worldwide ToMV isolates were analyzed to estimate the genetic structure and diversity of this virus and the involved evolutionary forces. The phylogenetic analysis showed three clades with high bootstrap support: Clade I contained three ToMV isolates from Brazil collected from pepper, Clade II comprised one Brazilian ToMV isolate from pepper, and Clade III was composed of ToMV isolates collected from different plant hosts (pepper, tomato, eggplant, lilac, camellia, dogwood, red spruce, etc.) and water (from melting ice, lakes and streams) from different countries: USA, Brazil, Korea, Germany, Spain, Denmark (Greenland), China, Taiwan, Malaysia, Iran, and Kazakhstan. With the exception of Brazil, nucleotide diversity within and between different geographic regions was very low, although statistical analyses suggested some gene flow between most of these regions. Our analyses also suggested a strong negative selection which could have contributed to the genetic stability of ToMV.
Starting Page	435
Ending Page	438
Page Count	4
File Format	PDF
ISSN	09208569
Journal	Virus Genes
Volume Number	43
Issue Number	3
e-ISSN	1572994X
Language	English
Publisher	Springer US
Publisher Date	2011-09-01
Publisher Place	Boston
Access Restriction	One Nation One Subscription (ONOS)
Subject Keyword	Plant virus Tobamovirus ToMV Phylogeny Selection Plant Sciences Virology Medical Microbiology
Content Type	Text
Resource Type	Article
Subject	Virology Genetics Medicine Molecular Biology

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