NDLI: Comprehensive search for chicken W chromosome-linked genes expressed in early female embryos from the female-minus-male subtracted cDNA macroarray

Content Provider	Springer Nature Link
Author	Yamada, Daisuke Koyama, Yoshiyuki Komatsubara, Mai Urabe, Mayuko Mori, Masako Hashimoto, Yoichi Nii, Ryosuke Kobayashi, Midori Nakamoto, Ayako Ogihara, Jun Kato, Jun Mizu, Shigeki
Copyright Year	2004
Abstract	In order to seek chicken W chromosome-linked genes expressed significantly earlier than the time of gonadal differentiation, female-minus-male-subtracted cDNA macroarrays were prepared from day 2 (Hamburger-Hamilton stages 12-13), day 3 (stages 19-20) and day 4 (stages 24-25) embryos. From a total of 15-744 macroarrayed cDNA clones, 610 clones exhibiting significantly female-specific expression were selected. When each one of the 610 cDNA clones was used as a probe in Southern blot hybridization with male or female chicken genomic DNA, 62 clones, grouped into eight (A-H) types according to their patterns of hybridization, were considered to be derived from W chromosome-linked genes. When representative cDNA clones in each type were sequenced, clones derived from two known W-linked genes; SPIN-W and ATP5A1W, and from two hitherto unknown W-linked genes, represented by 2d-2D9 and 2d-2F9 clones, were identified and their localizations on the W chromosome were confirmed by fluorescence in-situ hybridization. The 2d-2D9 sequence has no significant homology with other genes in databases but 2d-2F9 has a region which shows partial homology to the consensus sequence of the AAA ATPase superfamily. Both 2d-2D9 and 2d-2F9 sequences are found in contigs of undetermined chromosome-linkage in the Draft Chicken Genome Sequence.
Starting Page	741
Ending Page	754
Page Count	14
File Format	PDF
ISSN	09673849
Journal	Chromosome Research
Volume Number	12
Issue Number	7
e-ISSN	15736849
Language	English
Publisher	Kluwer Academic Publishers
Publisher Date	2004-01-01
Publisher Place	Dordrecht
Access Restriction	One Nation One Subscription (ONOS)
Subject Keyword	Human Genetics Plant Genetics & Genomics Animal Genetics and Genomics
Content Type	Text
Resource Type	Article
Subject	Genetics

Sl.	Authority	Responsibilities	Communication Details
1	Ministry of Education (GoI), Department of Higher Education	Sanctioning Authority	https://www.education.gov.in/ict-initiatives
2	Indian Institute of Technology Kharagpur	Host Institute of the Project: The host institute of the project is responsible for providing infrastructure support and hosting the project	https://www.iitkgp.ac.in
3	National Digital Library of India Office, Indian Institute of Technology Kharagpur	The administrative and infrastructural headquarters of the project	Dr. B. Sutradhar bsutra@ndl.gov.in
4	Project PI / Joint PI	Principal Investigator and Joint Principal Investigators of the project	Dr. B. Sutradhar bsutra@ndl.gov.in Prof. Saswat Chakrabarti will be added soon
5	Website/Portal (Helpdesk)	Queries regarding NDLI and its services	support@ndl.gov.in
6	Contents and Copyright Issues	Queries related to content curation and copyright issues	content@ndl.gov.in
7	National Digital Library of India Club (NDLI Club)	Queries related to NDLI Club formation, support, user awareness program, seminar/symposium, collaboration, social media, promotion, and outreach	clubsupport@ndl.gov.in
8	Digital Preservation Centre (DPC)	Assistance with digitizing and archiving copyright-free printed books	dpc@ndl.gov.in
9	IDR Setup or Support	Queries related to establishment and support of Institutional Digital Repository (IDR) and IDR workshops	idr@ndl.gov.in

Comprehensive search for chicken W chromosome-linked genes expressed in early female embryos from the female-minus-male subtracted cDNA macroarray

Molecular and cytological characterization of SspI-family repetitive sequence on the chicken W chromosome

Identification and chromosome assignment of 23 genes expressed in meat and dairy cattle

Female-specific hyperacetylation of histone H4 in the chicken Z chromosome

Expression pattern of X-linked genes in sex chromosome aneuploid bovine cells

Meiotic instability of chicken ultra-long telomeres and mapping of a 2.8 megabase array to the W-sex chromosome

Mutational landscape of the human Y chromosome-linked genes and loci in patients with hypogonadism

Comparison of the chicken and zebra finch Z chromosomes shows evolutionary rearrangements

Identification of the female-determining region of the W chromosome in Bombyx mori

Comprehensive search for chicken W chromosome-linked genes expressed in early female embryos from the female-minus-male subtracted cDNA macroarray

Similar Documents

Comprehensive search for chicken W chromosome-linked genes expressed in early female embryos from the female-minus-male subtracted cDNA macroarray

Molecular and cytological characterization of SspI-family repetitive sequence on the chicken W chromosome

Identification and chromosome assignment of 23 genes expressed in meat and dairy cattle

Female-specific hyperacetylation of histone H4 in the chicken Z chromosome

Expression pattern of X-linked genes in sex chromosome aneuploid bovine cells

Meiotic instability of chicken ultra-long telomeres and mapping of a 2.8 megabase array to the W-sex chromosome

Mutational landscape of the human Y chromosome-linked genes and loci in patients with hypogonadism

Comparison of the chicken and zebra finch Z chromosomes shows evolutionary rearrangements

Identification of the female-determining region of the W chromosome in Bombyx mori

Comprehensive search for chicken W chromosome-linked genes expressed in early female embryos from the female-minus-male subtracted cDNA macroarray