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Molecular Characterization, 3D Model Analysis, and Expression Pattern of the CmUBC Gene Encoding the Melon Ubiquitin-Conjugating Enzyme Under Drought and Salt Stress Conditions

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Molecular Characterization, 3D Model Analysis, and Expression Pattern of the CmUBC Gene Encoding the Melon Ubiquitin-Conjugating Enzyme Under Drought and Salt Stress Conditions

Content Provider	Springer Nature Link
Author	Baloglu, Mehmet Cengiz Patir, Meliha Gorkem
Copyright Year	2013
Abstract	Ubiquitin-conjugating (UBC) enzyme is a key enzyme in ubiquitination. Here, we describe the cloning, characterization, and expression pattern of a novel gene, CmUBC, from a melon. Comparison of the deduced amino acid sequences allowed the identification of highly conserved motifs. Synteny analysis between Cucumis sativus L. and Arabidopsis demonstrated that homologs of several Cucumis UBC genes were found in corresponding syntenic blocks of Arabidopsis. The homology structure model of the CmUBC protein was constructed. UBCs from melon, yeast, and Arabidopsis were highly conserved in their three-dimensional folding. CmUBC was ubiquitously expressed in all melon tissues. Increased transcript levels of CmUBC were observed during drought and salinity stresses, which suggested that the expression of the CmUBC gene in melon plants is responsive to physiological water stress. These results suggested that the CmUBC gene might play an important role in the modulation of the ubiquitination pathway.
Starting Page	90
Ending Page	105
Page Count	16
File Format	PDF
ISSN	00062928
Journal	Biochemical Genetics
Volume Number	52
Issue Number	1-2
e-ISSN	15734927
Language	English
Publisher	Springer US
Publisher Date	2013-11-10
Publisher Place	Boston
Access Restriction	One Nation One Subscription (ONOS)
Subject Keyword	Cucumis melo L. Ubiquitin-conjugating enzyme (UBC) 3D model analysis Gene expression Water-stress responses Human Genetics Biochemistry Zoology Medical Microbiology
Content Type	Text
Resource Type	Article
Subject	Genetics Medicine Biochemistry Molecular Biology Ecology, Evolution, Behavior and Systematics

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Molecular Characterization, 3D Model Analysis, and Expression Pattern of the CmUBC Gene Encoding the Melon Ubiquitin-Conjugating Enzyme Under Drought and Salt Stress Conditions