NDLI: Gene expression profiling in muscle tissues of the commercially important teleost, Siniperca chuatsi L.

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Gene expression profiling in muscle tissues of the commercially important teleost, Siniperca chuatsi L.

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Gene expression profiling in muscle tissues of the commercially important teleost, Siniperca chuatsi L.

Content Provider	Springer Nature Link
Author	Chu, Wuying Fu, Guihong Chen, Jia Chen, Dinggen Meng, Tao Zhou, Ruixue Xia, Xinjie Zhang, Jianshe
Copyright Year	2009
Abstract	The Chinese mandarin fish (CMF) has recently become an important species for culture because of its good meat texture, flavor, and high nutritional value. To identify differentially expressed genes controlling meat quality and muscle formation, the Affymetrix Zebrafish genome array was used to screen gene expression profiles in the muscle tissues of the CMF, S. chuatsi. Total RNA was isolated from muscle tissues, labeled with biotin, and hybridized to Zebrafish genome array. Of 14,900 genes on the array, 375 genes were significantly expressed in the muscle tissues of the test fish, in which 180 genes were up-regulated and 195 were down-regulated in muscle tissues. Among the 180 up-regulated genes, 49 were identified and 131 were not found in data banks. The 49 known genes were categorized into eight functional groups, several of which may influence muscle structure and development. The 195 down-regulated genes were classified into nine functional groups. Of the genes identified, 28 genes are directly related to the muscle structural formation and myogenesis. The current study is the first to describe the gene expression profiles in muscle tissues of S. chuatsi, and the data may provide gene transcriptional information with application in aquaculture. A better understanding of the genes controlling muscle formation and textural structures in fish is also provided by these data.
Starting Page	667
Ending Page	678
Page Count	12
File Format	PDF
ISSN	09676120
Journal	Aquaculture International
Volume Number	18
Issue Number	4
e-ISSN	1573143X
Language	English
Publisher	Springer Netherlands
Publisher Date	2009-10-30
Publisher Place	Dordrecht
Access Restriction	One Nation One Subscription (ONOS)
Subject Keyword	Chinese mandarin fish Siniperca chuatsi Gene expression profile Zebrafish genome array Real-time PCR Zoology Freshwater & Marine Ecology
Content Type	Text
Resource Type	Article
Subject	Aquatic Science Agronomy and Crop Science

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Cloning, characterization and expression analysis of a CXCR1-like gene from mandarin fish Siniperca chuatsi

Identification and expression analysis of two HSP70 isoforms in mandarin fish Siniperca chuatsi

Identification and Analysis of Muscle-Related Protein Isoforms Expressed in the White Muscle of the Mandarin Fish (Siniperca chuatsi)

Cloning and spatiotemporal expression of pepsinogen and gastric proton pump genes from mandarin fish (Siniperca chuatsi) during early ontogeny

Molecular characterization, tissue distribution, and expression regulation from fasting and re-feeding of two growth hormone receptors in mandarin fish Siniperca chuatsi

Effects of turbidity and light intensity on foraging success of juvenile mandarin fish Siniperca chuatsi (Basilewsky)

Characterization of dmrts and their potential role in gonadal development of mandarin fish (Siniperca chuatsi)

Molecular cloning and characterization of estrogen and androgen receptors in Mandarin fish, Siniperca chuatsi

Serum immunoglobulin of the mandarin fish,Siniperca chuatsi with development of polyclonal antibody

Gene expression profiling in muscle tissues of the commercially important teleost, Siniperca chuatsi L.

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Gene expression profiling in muscle tissues of the commercially important teleost, Siniperca chuatsi L.