NDLI: Arabidopsis kinome: after the casting

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EST and microarray analyses of pathogen-responsive genes in hot pepper (Capsicum annuum L.) non-host resistance against soybean pustule pathogen (Xanthomonas axonopodis pv. glycines)

Functional & Integrative Genomics : Volume 4, Issue 2, May 2004

Functional & Integrative Genomics : Volume 4, Issue 1, March 2004

Functional & Integrative Genomics : Volume 3

Functional & Integrative Genomics : Volume 2

Functional & Integrative Genomics : Volume 1

Arabidopsis kinome: after the casting

Content Provider	Springer Nature Link
Author	Champion, A. Kreis, M. Mockaitis, K. Picaud, A. Henry, Y.
Copyright Year	2004
Abstract	Arabidopsis thaliana is used as a favourite experimental organism for many aspects of plant biology. We capitalized on the recently available Arabidopsis genome sequence and predicted proteome, to draw up a genome-scale protein serine/threonine kinase (PSTK) inventory. The PSTKs represent about 4% of the A. thaliana proteome. In this study, we provide a description of the content and diversity of the non-receptor PSTKs. These kinases have crucial functions in sensing, mediating and coordinating cellular responses to an extensive range of stimuli. A total of 369 predicted non receptor PSTKs were detailed: the Raf superfamily, the CMGC, CaMK, AGC and STE families, as well as a few small clades and orphan sequences. An extensive relationship analysis of these kinases allows us to classify the proteins in superfamilies, families, sub-families and groups. The classification provides a better knowledge of the characteristics shared by the different clades. We focused on the MAP kinase module elements, with particular attention to their docking sites for protein-protein interaction and their biological function. The large number of A. thaliana genes encoding kinases might have been achieved through successive rounds of gene and genome duplications. The evolution towards an increasing gene number suggests that functional redundancy plays an important role in plant genetic robustness.
Starting Page	163
Ending Page	187
Page Count	25
File Format	PDF
ISSN	1438793X
Journal	Functional & Integrative Genomics
Volume Number	4
Issue Number	3
e-ISSN	14387948
Language	English
Publisher	Springer-Verlag
Publisher Date	2004-01-22
Publisher Place	Berlin, Heidelberg
Access Restriction	One Nation One Subscription (ONOS)
Subject Keyword	Arabidopsis Kinase diversity Duplications
Content Type	Text
Resource Type	Article
Subject	Genetics Medicine

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