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| Content Provider | Springer Nature Link |
|---|---|
| Author | You, Xiao Yan Liu, Chao Wang, Sheng Yue Jiang, Cheng Ying Shah, Shiraz A. Prangishvili, David She, Qunxin Liu, Shuang Jiang Garrett, Roger A. |
| Copyright Year | 2011 |
| Abstract | The Acidianus hospitalis W1 genome consists of a minimally sized chromosome of about 2.13 Mb and a conjugative plasmid pAH1 and it is a host for the model filamentous lipothrixvirus AFV1. The chromosome carries three putative replication origins in conserved genomic regions and two large regions where non-essential genes are clustered. Within these variable regions, a few orphan orfB and other elements of the IS200/607/605 family are concentrated with a novel class of MITE-like repeat elements. There are also 26 highly diverse vapBC antitoxin–toxin gene pairs proposed to facilitate maintenance of local chromosomal regions and to minimise the impact of environmental stress. Complex and partially defective CRISPR/Cas/Cmr immune systems are present and interspersed with five vapBC gene pairs. Remnants of integrated viral genomes and plasmids are located at five intron-less tRNA genes and several non-coding RNA genes are predicted that are conserved in other Sulfolobus genomes. The putative metabolic pathways for sulphur metabolism show some significant differences from those proposed for other Acidianus and Sulfolobus species. The small and relatively stable genome of A. hospitalis W1 renders it a promising candidate for developing the first Acidianus genetic systems. |
| Starting Page | 487 |
| Ending Page | 497 |
| Page Count | 11 |
| File Format | |
| ISSN | 14310651 |
| Journal | Extremophiles |
| Volume Number | 15 |
| Issue Number | 4 |
| e-ISSN | 14334909 |
| Language | English |
| Publisher | Springer Japan |
| Publisher Date | 2011-05-24 |
| Publisher Place | Japan |
| Access Restriction | One Nation One Subscription (ONOS) |
| Subject Keyword | Toxin–antitoxin VapBC CRISPR Sulphur metabolism OrfB element MITE Biotechnology Microbiology Ecology |
| Content Type | Text |
| Resource Type | Article |
| Subject | Medicine Molecular Medicine Microbiology |
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