NDLI: Characterization and analysis of the full-length genome of a strain of the European QX-like genotype of infectious bronchitis virus

Content Provider	Springer Nature Link
Author	Abro, Shahid Hussain Renström, Lena H. M. Ullman, Karin Belák, Sándor Baule, Claudia
Copyright Year	2012
Abstract	In recent years, strains of infectious bronchitis virus belonging to the QX-like genotype have been causing huge economic losses in commercial chicken flocks in different countries in Europe. In order to expand the knowledge of the molecular features of these viruses, we have sequenced and characterized the complete genome of European QX-like IBV strain CK/SWE/0658946/10, which was isolated in 2010 in Sweden. The genome is 27664 nucleotides in length, comprising six genes and 5′ and 3′ untranslated regions. The ORF1a, spike and nucleocapsid genes were under strong positive selective pressure that resulted in genetic diversity in relation to classical IBV isolates. The full-length genome of the CK/SWE/0658946/10 strain has the highest nucleotide sequence identity (93.18%) to ITA/90254/2005 and the lowest nucleotide identity (89.10%) to strain CQ04-1. Phylogenetic analysis of partial S1 gene sequences of IBV strains showed that the European QX-like genotype comprises strains that have been predominantly circulating in this continent for the past decade.
Starting Page	1211
Ending Page	1215
Page Count	5
File Format	PDF
ISSN	03048608
Journal	Archives of Virology
Volume Number	157
Issue Number	6
e-ISSN	14328798
Language	English
Publisher	Springer Vienna
Publisher Date	2012-03-17
Publisher Place	Vienna
Access Restriction	One Nation One Subscription (ONOS)
Subject Keyword	Virology Infectious Diseases Medical Microbiology
Content Type	Text
Resource Type	Article
Subject	Virology Medicine

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