NDLI: Contributions of genetic drift and negative selection on the evolution of three strains of wheat streak mosaic tritimovirus

Please wait, while we are loading the content...

Genetic variability of respiratory syncytial virus subgroup B strain isolated during the last 20 years from the same region in Japan: existence of time-dependent linear genetic drifts

The readthrough region of Potato mop-top virus (PMTV) coat protein encoding RNA, the second largest RNA of PMTV genome, undergoes structural changes in naturally infected and experimentally inoculated plants

Detection and molecular characterization of cultivable caliciviruses from clinically normal mink and enteric caliciviruses associated with diarrhea in mink

An element downstream of the transcription start site is required for activation of Bombyx mori nucleopolyhedrovirus bro-c promoter

Expression of receptor for ecotropic murine leukemia virus on hematopoietic cells

Molecular epidemiology of echovirus 30 in Europe: succession of dominant sublineages within a single major genotype

Inhibition of porcine reproductive and respiratory syndrome virus by interferon-gamma and recovery of virus replication with 2-aminopurine

Direct evidence for genome segment reassortment between concurrently-circulating human rotavirus strains

Natural minus-strand RNAs of alfalfa mosaic virus as in vitro templates for viral RNA polymerase. 3′-Terminal non-coded guanosine and coat protein are insufficient factors for full-size plus-strand synthesis

Molecular epidemiology of enterovirus 71 in Taiwan

Effects of a second intron on recombinant MFG retroviral vector

Nucleotide sequence comparison of the 3′ terminal region of the genome of pepper vein mottle virusisolates from Tunisia and Ivory Coast

Contributions of genetic drift and negative selection on the evolution of three strains of wheat streak mosaic tritimovirus

Obituary : In Memoriam¶Joseph Louis Melnick (1914–2001)

Archives of Virology : Volume 146, Issue 2, March 2001

Archives of Virology : Volume 146, Issue 1, January 2001

Archives of Virology : Volume 145

Archives of Virology : Volume 144

Archives of Virology : Volume 143

Archives of Virology : Volume 142

Contributions of genetic drift and negative selection on the evolution of three strains of wheat streak mosaic tritimovirus

Content Provider	Springer Nature Link
Author	Choi, I. R. Hall, J. S. Henry, M. Zhang, L. Hein, G. L. French, R. Stenger, D. C.
Copyright Year	2001
Abstract	Genome sequences of three Wheat streak mosaic virus (WSMV) strains were compared. The Type and Sidney 81 strains of WSMV from the American Great Plains were closely related, with sequence identities of 97.6% (nucleotide) and 98.7% (amino acid). In contrast, the El Batán 3 strain from central Mexico was divergent, and shared only 79.2–79.3% (nucleotide) and 90.3–90.5% (amino acid) sequence identity with Type and Sidney 81. All three WSMV strains were serologically related, however the El Batán 3 capsid protein (CP) had 15 fewer amino acid residues. Phylogenetic analysis of the CP cistron indicated that Type, Sidney 81, and nine other American isolates of WSMV were closely related and distinct from the El Batán 3 sequence. Nucleotide substitutions among the WSMV strains were not randomly distributed across the genome with more variation within P1, HC-Pro, and CP, and less within P3. One 400-nucleotide region of the genome, corresponding to the 3′-end of P3, was strikingly deficient in silent substitutions. Nonetheless, the ratio of synonymous to non-synonymous substitutions throughout the genome was essentially the same for all three WSMV strains. Collectively, our data indicate that both genetic drift and negative selection have contributed to the evolution of WSMV strains.
Starting Page	619
Ending Page	628
Page Count	10
File Format	PDF
ISSN	03048608
Journal	Archives of Virology
Volume Number	146
Issue Number	3
e-ISSN	14328798
Language	English
Publisher	Springer-Verlag
Publisher Date	2001-03-27
Publisher Place	Wien
Access Restriction	One Nation One Subscription (ONOS)
Content Type	Text
Resource Type	Article
Subject	Virology Medicine

Sl.	Authority	Responsibilities	Communication Details
1	Ministry of Education (GoI), Department of Higher Education	Sanctioning Authority	https://www.education.gov.in/ict-initiatives
2	Indian Institute of Technology Kharagpur	Host Institute of the Project: The host institute of the project is responsible for providing infrastructure support and hosting the project	https://www.iitkgp.ac.in
3	National Digital Library of India Office, Indian Institute of Technology Kharagpur	The administrative and infrastructural headquarters of the project	Dr. B. Sutradhar bsutra@ndl.gov.in
4	Project PI / Joint PI	Principal Investigator and Joint Principal Investigators of the project	Dr. B. Sutradhar bsutra@ndl.gov.in Prof. Saswat Chakrabarti will be added soon
5	Website/Portal (Helpdesk)	Queries regarding NDLI and its services	support@ndl.gov.in
6	Contents and Copyright Issues	Queries related to content curation and copyright issues	content@ndl.gov.in
7	National Digital Library of India Club (NDLI Club)	Queries related to NDLI Club formation, support, user awareness program, seminar/symposium, collaboration, social media, promotion, and outreach	clubsupport@ndl.gov.in
8	Digital Preservation Centre (DPC)	Assistance with digitizing and archiving copyright-free printed books	dpc@ndl.gov.in
9	IDR Setup or Support	Queries related to establishment and support of Institutional Digital Repository (IDR) and IDR workshops	idr@ndl.gov.in

Contributions of genetic drift and negative selection on the evolution of three strains of wheat streak mosaic tritimovirus

Complete nucleotide sequence of Oat necrotic mottle virus: A distinct Tritimovirus species (family Potyviridae) most closely related to Wheat streak mosaic virus

Characterization and genetic diversity of sugarcane streak mosaic virus causing mosaic in sugarcane

Fully biologically active in vitro transcripts of the eriophyid mite-transmitted wheat streak mosaic tritimovirus.

First detection of wheat streak mosaic virus in Germany: molecular and biological characteristics

Mapping of the P1 proteinase cleavage site in the polyprotein of Wheat streak mosaic virus (genus Tritimovirus).

Substitution of conserved cysteine residues in wheat streak mosaic virus HC-Pro abolishes virus transmission by the wheat curl mite

Tall oatgrass mosaic virus (TOgMV): a novel member of the genus Tritimovirus infecting Arrhenatherum elatius

Effectiveness of three potential sources of resistance in wheat against Wheat streak mosaic virus under field conditions

Contributions of genetic drift and negative selection on the evolution of three strains of wheat streak mosaic tritimovirus

Similar Documents

Contributions of genetic drift and negative selection on the evolution of three strains of wheat streak mosaic tritimovirus

Complete nucleotide sequence of Oat necrotic mottle virus: A distinct Tritimovirus species (family Potyviridae) most closely related to Wheat streak mosaic virus

Characterization and genetic diversity of sugarcane streak mosaic virus causing mosaic in sugarcane

Fully biologically active in vitro transcripts of the eriophyid mite-transmitted wheat streak mosaic tritimovirus.

First detection of wheat streak mosaic virus in Germany: molecular and biological characteristics

Mapping of the P1 proteinase cleavage site in the polyprotein of Wheat streak mosaic virus (genus Tritimovirus).

Substitution of conserved cysteine residues in wheat streak mosaic virus HC-Pro abolishes virus transmission by the wheat curl mite

Tall oatgrass mosaic virus (TOgMV): a novel member of the genus Tritimovirus infecting Arrhenatherum elatius

Effectiveness of three potential sources of resistance in wheat against Wheat streak mosaic virus under field conditions

Contributions of genetic drift and negative selection on the evolution of three strains of wheat streak mosaic tritimovirus