NDLI: Chloroplast microsatellite diversity of Opisthopappus Shih (Asteraceae) endemic to China

Content Provider	Springer Nature Link
Author	Wang, Yiling
Copyright Year	2013
Abstract	The genus Opisthopappus consists of two species, O. longilobus and O. taihangensis. Both of them are important economic and ornamental plants but endangered in China. In this study, genetic variation in four populations of O. longilobus and nine populations of O. taihangensis was estimated by chloroplast microsatellites (cpSSR). Low genetic diversity was detected in O. longilobus and O. taihangensis populations. The percentages of polymorphic loci (PPL), Nei’s gene diversities (h), and Shannon’s indices (I) was 53.56 %, 0.074, and 0.139, respectively, for O. longilobus, while PPL = 44.44 %, h = 0.018, I = 0.048 for O. taihangensis. Thirteen chloroplast haplotypes were identified from 153 individuals analyzed of two species. Ten haplotypes were found in O. longilobus, while seven in O. taihangensis. Haplotype 1 was the common and ancestral one. The level of haplotype diversity was also low (Hd O. longilobus = 0.4875, Hd O. taihangensis = 0.3452). AMOVA analysis revealed that the majority of the genetic differences was partitioned within populations of O. longilobus and O. taihangensis, as confirmed by PCoA and cluster analysis. Inter-population genetic distances among population of O. longilobus and O. taihangensis correlated insignificantly with geographic distances (r = 0.286, P = 0.128 for O. longilobus vs. r = 0.356, P = 0.058 for O. taihangensis). The self-compatibility, effective gene flow, narrow geographical distribution, and historical factors may be the main factors causing differentiation in the genetic structure of O. longilobus and O. taihangensis populations.
Starting Page	1849
Ending Page	1858
Page Count	10
File Format	PDF
ISSN	03782697
Journal	Plant Systematics and Evolution
Volume Number	299
Issue Number	10
e-ISSN	16156110
Language	English
Publisher	Springer Vienna
Publisher Date	2013-05-24
Publisher Place	Vienna
Access Restriction	One Nation One Subscription (ONOS)
Subject Keyword	Opisthopappus cpSSR Genetic diversity Population structure Plant Sciences Plant Ecology Plant Anatomy/Development Plant Systematics/Taxonomy/Biogeography
Content Type	Text
Resource Type	Article
Subject	Plant Science Ecology, Evolution, Behavior and Systematics

Sl.	Authority	Responsibilities	Communication Details
1	Ministry of Education (GoI), Department of Higher Education	Sanctioning Authority	https://www.education.gov.in/ict-initiatives
2	Indian Institute of Technology Kharagpur	Host Institute of the Project: The host institute of the project is responsible for providing infrastructure support and hosting the project	https://www.iitkgp.ac.in
3	National Digital Library of India Office, Indian Institute of Technology Kharagpur	The administrative and infrastructural headquarters of the project	Dr. B. Sutradhar bsutra@ndl.gov.in
4	Project PI / Joint PI	Principal Investigator and Joint Principal Investigators of the project	Dr. B. Sutradhar bsutra@ndl.gov.in Prof. Saswat Chakrabarti will be added soon
5	Website/Portal (Helpdesk)	Queries regarding NDLI and its services	support@ndl.gov.in
6	Contents and Copyright Issues	Queries related to content curation and copyright issues	content@ndl.gov.in
7	National Digital Library of India Club (NDLI Club)	Queries related to NDLI Club formation, support, user awareness program, seminar/symposium, collaboration, social media, promotion, and outreach	clubsupport@ndl.gov.in
8	Digital Preservation Centre (DPC)	Assistance with digitizing and archiving copyright-free printed books	dpc@ndl.gov.in
9	IDR Setup or Support	Queries related to establishment and support of Institutional Digital Repository (IDR) and IDR workshops	idr@ndl.gov.in

Population structure and genetic variation in the genus Dipteronia Oliv. (Aceraceae) endemic to China as revealed by cpSSR analysis

Genetic diversity in the threatened insular endemic plantAster asa-grayi (Asteraceae)

Microsatellite markers unravel the population genetic structure of the Azorean Leontodon: implications in conservation

Plasmon analysis in wheat alloplasmic lines using morphological and chloroplast microsatellite markers

Genetic analysis of aMicroseris douglasii (Asteraceae) population polymorphic for an alien chloroplast type

Population genetics of the widespread shrub Forsythia suspensa (Oleaceae) in warm-temperate China using microsatellite loci: implication for conservation

High genetic diversity and significant population structure in Cedrus brevifolia Henry, a narrow endemic Mediterranean tree from Cyprus

Genetic diversity, structure, and patterns of differentiation in the genus Vitis

Genetic variation of Pinus uncinata (Pinaceae) in the Pyrenees determined with cpSSR markers

Chloroplast microsatellite diversity of Opisthopappus Shih (Asteraceae) endemic to China

Similar Documents

Population structure and genetic variation in the genus Dipteronia Oliv. (Aceraceae) endemic to China as revealed by cpSSR analysis

Genetic diversity in the threatened insular endemic plantAster asa-grayi (Asteraceae)

Microsatellite markers unravel the population genetic structure of the Azorean Leontodon: implications in conservation

Plasmon analysis in wheat alloplasmic lines using morphological and chloroplast microsatellite markers

Genetic analysis of aMicroseris douglasii (Asteraceae) population polymorphic for an alien chloroplast type

Population genetics of the widespread shrub Forsythia suspensa (Oleaceae) in warm-temperate China using microsatellite loci: implication for conservation

High genetic diversity and significant population structure in Cedrus brevifolia Henry, a narrow endemic Mediterranean tree from Cyprus

Genetic diversity, structure, and patterns of differentiation in the genus Vitis

Genetic variation of Pinus uncinata (Pinaceae) in the Pyrenees determined with cpSSR markers

Chloroplast microsatellite diversity of Opisthopappus Shih (Asteraceae) endemic to China