NDLI: Porcine skeletal muscle differentially expressed gene ATP5B: molecular characterization, expression patterns, and association analysis with meat quality traits

Please wait, while we are loading the content...

Sequence analysis of three pigmentation genes in the Newfoundland population of Canis latrans links the Golden Retriever Mc1r variant to white coat color in coyotes

Porcine skeletal muscle differentially expressed gene ATP5B: molecular characterization, expression patterns, and association analysis with meat quality traits

Genome-wide copy number variation in Hanwoo, Black Angus, and Holstein cattle

Mammalian Genome : Volume 24, Issue 1-2, February 2013

Mammalian Genome : Volume 23

Mammalian Genome : Volume 22

Mammalian Genome : Volume 21

Mammalian Genome : Volume 20

Mammalian Genome : Volume 19

Mammalian Genome : Volume 18

Mammalian Genome : Volume 17

Mammalian Genome : Volume 16

Mammalian Genome : Volume 15

Mammalian Genome : Volume 14

Mammalian Genome : Volume 13

Mammalian Genome : Volume 12

Mammalian Genome : Volume 11

Mammalian Genome : Volume 10

Mammalian Genome : Volume 9

Mammalian Genome : Volume 8

Mammalian Genome : Volume 7

Porcine skeletal muscle differentially expressed gene ATP5B: molecular characterization, expression patterns, and association analysis with meat quality traits

Content Provider	Springer Nature Link
Author	Xu, Haixia Xu, Yongjie Liang, Xiaojuan Wang, Yanbo Jin, Fangfang Liu, Dengying Ma, Yun Yuan, Hongyu Song, Xinqiang Zeng, Wenxian
Copyright Year	2013
Abstract	The 2-DE/MS-based proteomics approach was used to investigate the differences of porcine skeletal muscle, and ATP5B was identified as one differential expression protein. In the present study, ATP5B gene was further cloned by RT-PCR, the sequence was analyzed using the bioinformatics method, and the mRNA expression was detected by qRT-PCR. Sequence analysis showed that the porcine ATP5B gene contains an ORF encoding 528-amino-acid residues with 49 and 166 nucleotides in the 5′ and 3′ UTRs, respectively. The mRNA of ATP5B was widely expressed in all 14 tissues tested, but especially highly expressed in parorchis and fat. The expression pattern of ATP5B was similar in Large White and Meishan breeds, showing that the expression was upregulated by 3 days after birth and downregulated during postnatal development of skeletal muscle. Comparing the two breeds, the mRNA abundance of ATP5B in Large White was more highly expressed than in Meishan at all developmental stages (P < 0.05). Moreover, a synonymous mutation, G75A in exon 8, was identified and association analysis with the traits of meat quality showed that it was significantly associated with the RLF, FMP, IFR, IMF, and IMW (P < 0.05). These results suggested that ATP5B probably plays a key role in porcine skeletal muscle development and may provide further insight into the molecular mechanisms responsible for breed-specific differences in meat quality.
Starting Page	142
Ending Page	150
Page Count	9
File Format	PDF
ISSN	09388990
Journal	Mammalian Genome
Volume Number	24
Issue Number	3-4
e-ISSN	14321777
Language	English
Publisher	Springer-Verlag
Publisher Date	2013-02-19
Publisher Place	New York
Access Restriction	One Nation One Subscription (ONOS)
Subject Keyword	Cell Biology Anatomy Zoology
Content Type	Text
Resource Type	Article
Subject	Genetics

Sl.	Authority	Responsibilities	Communication Details
1	Ministry of Education (GoI), Department of Higher Education	Sanctioning Authority	https://www.education.gov.in/ict-initiatives
2	Indian Institute of Technology Kharagpur	Host Institute of the Project: The host institute of the project is responsible for providing infrastructure support and hosting the project	https://www.iitkgp.ac.in
3	National Digital Library of India Office, Indian Institute of Technology Kharagpur	The administrative and infrastructural headquarters of the project	Dr. B. Sutradhar bsutra@ndl.gov.in
4	Project PI / Joint PI	Principal Investigator and Joint Principal Investigators of the project	Dr. B. Sutradhar bsutra@ndl.gov.in Prof. Saswat Chakrabarti will be added soon
5	Website/Portal (Helpdesk)	Queries regarding NDLI and its services	support@ndl.gov.in
6	Contents and Copyright Issues	Queries related to content curation and copyright issues	content@ndl.gov.in
7	National Digital Library of India Club (NDLI Club)	Queries related to NDLI Club formation, support, user awareness program, seminar/symposium, collaboration, social media, promotion, and outreach	clubsupport@ndl.gov.in
8	Digital Preservation Centre (DPC)	Assistance with digitizing and archiving copyright-free printed books	dpc@ndl.gov.in
9	IDR Setup or Support	Queries related to establishment and support of Institutional Digital Repository (IDR) and IDR workshops	idr@ndl.gov.in

Characterization of the porcine differentially expressed PDK4 gene and association with meat quality

Molecular characterization, expression analysis and association study with meat quality traits of porcine TTID gene

Molecular characterization of differentially expressed TXNIP gene and its association with porcine carcass traits

Porcine CSRP3: polymorphism and association analyses with meat quality traits and comparative analyses with CSRP1 and CSRP2

Association study between gene polymorphisms in PPAR signaling pathway and porcine meat quality traits

Molecular Characterization, Expression Profile, and Association Study with Meat Quality Traits of Porcine PFKM Gene

Molecular characterization and expression patterns of Lbx1 in porcine skeletal muscle

New SNP of the porcine Perilipin 2 (PLIN2) gene, association with carcass traits and expression analysis in skeletal muscle

Molecular characterization, expression analysis and association study with immune traits of porcine PSMB6 gene

Porcine skeletal muscle differentially expressed gene ATP5B: molecular characterization, expression patterns, and association analysis with meat quality traits

Similar Documents

Characterization of the porcine differentially expressed PDK4 gene and association with meat quality

Molecular characterization, expression analysis and association study with meat quality traits of porcine TTID gene

Molecular characterization of differentially expressed TXNIP gene and its association with porcine carcass traits

Porcine CSRP3: polymorphism and association analyses with meat quality traits and comparative analyses with CSRP1 and CSRP2

Association study between gene polymorphisms in PPAR signaling pathway and porcine meat quality traits

Molecular Characterization, Expression Profile, and Association Study with Meat Quality Traits of Porcine PFKM Gene

Molecular characterization and expression patterns of Lbx1 in porcine skeletal muscle

New SNP of the porcine Perilipin 2 (PLIN2) gene, association with carcass traits and expression analysis in skeletal muscle

Molecular characterization, expression analysis and association study with immune traits of porcine PSMB6 gene

Porcine skeletal muscle differentially expressed gene ATP5B: molecular characterization, expression patterns, and association analysis with meat quality traits