Branch-and-bound approach for parsimonious inference of a species tree from a set of gene family trees (2010).

Branch-and-Bound Approach for Parsimonious Inference of a Species Tree From a Set of Gene Family Trees

Report

Branch-and-Bound Approach for Parsimonious Inference of a Species Tree From a Set of Gene Family Trees

Article

SpeciesRax: A Tool for Maximum Likelihood Species Tree Inference from Gene Family Trees under Duplication, Transfer, and Loss

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SpeciesRax: A tool for maximum likelihood species tree inference from gene family trees under duplication, transfer, and loss

Preprint

Space of gene/species trees reconciliations and parsimonious models (2009).

From Gene Trees to Species Trees II: Species Tree Inference by Minimizing Deep Coalescence Events

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From gene trees to species trees II: Species tree inference in the deep coalescence model

Article

Inference of parsimonious species trees from multi-locus data by minimizing deep coalescences.

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