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Local Rules for Protein Folding on Triangular Lattice in the 2 D HP Model
| Content Provider | Semantic Scholar |
|---|---|
| Author | Peng, Sheng-Lung Wu, Hui-Chun Tang, Chuan Yi |
| Copyright Year | 2006 |
| Abstract | Agarwala et al. proposed two main folding rules, namely, backbone folding and arrow folding, on triangular lattice in 2D HP model [1]. However, these folding rules are not suitable for sequences with sparse H’s. In this paper, we propose two folding rules, which can support the weakness of their folding rules. The first rule is called starlike folding which is better than others for the sequences in the pattern of (HP). The other rule is called compact starlike folding which is suitable for the sequences in the combined patterns of (HP) and H. Together with backbone folding and arrow folding, we propose a general strategy of protein folding which suggests a suitable usage for all possible sequences. |
| File Format | PDF HTM / HTML |
| Alternate Webpage(s) | http://par.cse.nsysu.edu.tw/~algo/paper/paper04/A37.pdf |
| Language | English |
| Access Restriction | Open |
| Content Type | Text |
| Resource Type | Article |