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Characterization of the complete chloroplast genome of black poplar (Populus nigra L.)
| Content Provider | Scilit |
|---|---|
| Author | He, Qi Zhang, Zhiyang Wang, Weiwei |
| Copyright Year | 2019 |
| Description | The whole chloroplast (cp) genome sequence of Populus nigra L. has been characterized from Illumina pair-end sequencing. The complete cp genome was 156,451 bp in length, containing a large single copy region (LSC) of 84,529 bp, and a small single copy region (SSC) of 16,580 bp, which were separated by a pair of 27,671 bp inverted repeat regions (IRs). The genome contained 144 genes, including 99 protein-coding genes (84 PCG species), 37 tRNA genes (30 tRNA species), and 8 ribosomal RNA genes (4 rRNA species). Most of the gene species occur as a single copy, while 26 gene species occur in double copies. The overall AT content of P. nigra cp genome is 63.2%, while the corresponding values of the LSC, SSC, and IR regions are 65.4, 69.5, and 58.0%, respectively. Further, phylogenetic analysis suggested that P. nigra is closely related to the species of P. alba. |
| Related Links | https://www.tandfonline.com/doi/pdf/10.1080/23802359.2019.1591241?needAccess=true |
| Ending Page | 1262 |
| Page Count | 2 |
| Starting Page | 1261 |
| e-ISSN | 23802359 |
| DOI | 10.1080/23802359.2019.1591241 |
| Journal | Mitochondrial DNA Part B |
| Issue Number | 1 |
| Volume Number | 4 |
| Language | English |
| Publisher | Informa UK Limited |
| Publisher Date | 2019-01-02 |
| Access Restriction | Open |
| Subject Keyword | Horticulture Paper and Wood Chloroplast Genome Populus Nigra L. Phylogenetic Analysis |
| Content Type | Text |
