NDLI: Identification of deer species (Cervidae, Cetartiodactyla) in China using mitochondrial cytochrome c oxidase subunit I (mtDNA COI)

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Identification of deer species (Cervidae, Cetartiodactyla) in China using mitochondrial cytochrome c oxidase subunit I (mtDNA COI)

Content Provider	Scilit
Author	Cai, Yansen Zhang, Liang Wang, Yiwei Liu, Qin Shui, Qinglin Yue, Bisong Zhang, Zhihe Li, Jing
Copyright Year	2015
Description	In China, many deer species are threatened and their wild populations are decreasing. In this study, a segment of mitochondrial cytochrome oxidase subunit I (COI) was used as a DNA barcode to identify Cervidae species. COI sequences of 30 individuals from nine species were determined. Together with 148 sequences from BOLD and Genbank, a total of 178 sequences from 21 species of the family Cervidae were analyzed. The results showed that all species had unique COI sequences, and there was no barcode sharing among them. The mean K2P distances within species, genus, and family were 1.3%, 3.4%, and 8.9%, respectively. The neighbor-joining (NJ) tree was in most cases concordant with modern deer classification. Three species showed maximum intraspecific divergences higher than their minimum interspecific divergences. However, all species could be discriminated by their diagnostic characters in BLOG analysis. The present study confirmed that COI barcodes can effectively distinguish Cervidae species in China.
Related Links	http://www.tandfonline.com/doi/pdf/10.3109/19401736.2014.1003919
Ending Page	4243
Page Count	4
Starting Page	4240
ISSN	24701394
e-ISSN	24701408
DOI	10.3109/19401736.2014.1003919
Journal	Mitochondrial DNA Part A
Issue Number	6
Volume Number	27
Language	English
Publisher	Informa UK Limited
Publisher Date	2015-05-12
Access Restriction	Open
Subject Keyword	Journal: Mitochondrial Dna Part A Biodiversity Conservation Zoology Cervidae Coi Dna Barcoding Species Identification
Content Type	Text
Resource Type	Article
Subject	Genetics Molecular Biology

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