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The complete mitogenome of brown trout (Salmo trutta fario) and its phylogeny
| Content Provider | Scilit |
|---|---|
| Author | Sahoo, Prabhati K. Singh, Lalit Sharma, Lata Kumar, Rohit Singh, Vijay K. Ali, S. Singh, Atul K. Barat, Ashoktaru |
| Copyright Year | 2015 |
| Description | The complete mitochondrial genome of Salmo trutta fario, commonly known as brown trout, was sequenced using NGS technology. The mitochondrial genome size was determined to be 16 677 bp and composed of 13 protein-coding gene (PCG), 22 tRNAs, 2 rRNA genes, and 1 putative control region. The overall mitogenome composition of S. trutta fario is A: 28.13%, G: 16.44%, C: 29.47%, and T: 25.96% with A + T content of 54.09% and G + C content of 45.91%. The gene arrangement and the order are similar to other vertebrates. The phylogenetic tree constructed using 42 complete mitogenomes of Salmonidae fishes confirmed the position of the present species under the genus Salmo of subfamily Salmoninae. NGS platform was proved to be a rapid and time-saving technology to reveal complete mitogenomes. |
| Related Links | https://www.tandfonline.com/doi/pdf/10.3109/19401736.2015.1101565 |
| Ending Page | 4565 |
| Page Count | 3 |
| Starting Page | 4563 |
| ISSN | 24701394 |
| e-ISSN | 24701408 |
| DOI | 10.3109/19401736.2015.1101565 |
| Journal | Mitochondrial DNA Part A |
| Issue Number | 6 |
| Volume Number | 27 |
| Language | English |
| Publisher | Informa UK Limited |
| Publisher Date | 2015-12-07 |
| Access Restriction | Open |
| Subject Keyword | Journal: Mitochondrial Dna Part A Fisheries Sciences Brown Trout Illumina Miseq Next-generation Sequencing (ngs) Phylogeny Salmonidae |
| Content Type | Text |
| Resource Type | Article |
| Subject | Genetics Molecular Biology |
