NDLI: Complete chloroplast genome sequence of Sophora japonica 'JinhuaiJ2' (Papilionaceae), an important traditional chinese herb

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Complete chloroplast genome sequence of Sophora japonica 'JinhuaiJ2' (Papilionaceae), an important traditional chinese herb

Content Provider	Scilit
Author	Shi, Yancai Liu, Bingbing
Copyright Year	2019
Description	Sophora japonica 'JinhuaiJ2' (Papilionaceae), known as Chinese Scholar Tree, is an important traditional herb with a long history of cultivation in China. It's well known for its valuable medicinal values due to its flower buds contains abundant rutin. Here, we reported and characterized its complete chloroplast genome based on Illumina paired-end sequencing data. The complete plastid genome was 158,690 bp, which contained inverted repeats (IR) of 25,339 bp separated by a large single-copy (LSC) and a small single copy (SSC) of 88,978 bp and 19,034 bp, respectively. The cpDNA contains 129 genes, comprising 83 protein-coding genes, 38 tRNA genes and 8 rRNA genes. The overall GC content of the plastome is 36.1%. The phylogenetic analysis of 18 selected chloroplast genomes demonstrated that S. japonica 'JinhuaiJ2' was close to the species Tapiscia sinensis.
Related Links	https://www.tandfonline.com/doi/pdf/10.1080/23802359.2019.1703588?needAccess=true
Ending Page	320
Page Count	2
Starting Page	319
e-ISSN	23802359
DOI	10.1080/23802359.2019.1703588
Journal	Mitochondrial DNA Part B
Issue Number	1
Volume Number	5
Language	English
Publisher	Informa UK Limited
Publisher Date	2020-01-02
Access Restriction	Open
Subject Keyword	Journal: Mitochondrial Dna Part B Agronomy Horticulture Papilionaceae Chloroplast Genome Phylogenetic Analysis
Content Type	Text

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