NDLI: Visualization of Growth Curve Data from Phenotype Microarray Experiments

Content Provider	IEEE Xplore Digital Library
Author	Jacobsen, J.S. Joyner, D.C. Borglin, S.E. Hazen, T.C. Arkin, A.P. Bethel, E.W.
Copyright Year	2007
Description	Author affiliation: Lawrence Berkeley Nat. Lab., Livermore (Jacobsen, J.S.; Bethel, E.W.)
Abstract	Phenotype microarrays provide a technology to simultaneously survey the response of an organism to nearly 2,000 substrates, including carbon, nitrogen and potassium sources; varying pH; varying salt concentrations; and antibiotics. In order to more quickly and easily view and compare the large number of growth curves produced by phenotype microarray experiments, we have developed software to produce and display color images, each of which corresponds to a set of 96 growth curves. Using color images to represent growth curves data has proven to be a valuable way to assess experiment quality, compare replicates, facilitate comparison of the responses of different organisms, and identify significant phenotypes. The color images are linked to traditional plots of growth versus time, as well as to information about the experiment, organism, and substrate. In order to share and view information and data project-wide, all information, plots, and data are accessible using only a Web browser.
Starting Page	535
Ending Page	544
File Size	1426646
Page Count	10
File Format	PDF
ISBN	0769529003
ISSN	15506037
DOI	10.1109/IV.2007.131
Language	English
Publisher	Institute of Electrical and Electronics Engineers, Inc. (IEEE)
Publisher Date	2007-07-04
Publisher Place	Switzerland
Access Restriction	Subscribed
Rights Holder	Institute of Electrical and Electronics Engineers, Inc. (IEEE)
Subject Keyword	Data visualization Organisms Color Chemical technology Software tools Laboratories Chemical analysis Computer displays Space technology Shape
Content Type	Text
Resource Type	Article

Sl.	Authority	Responsibilities	Communication Details
1	Ministry of Education (GoI), Department of Higher Education	Sanctioning Authority	https://www.education.gov.in/ict-initiatives
2	Indian Institute of Technology Kharagpur	Host Institute of the Project: The host institute of the project is responsible for providing infrastructure support and hosting the project	https://www.iitkgp.ac.in
3	National Digital Library of India Office, Indian Institute of Technology Kharagpur	The administrative and infrastructural headquarters of the project	Dr. B. Sutradhar bsutra@ndl.gov.in
4	Project PI / Joint PI	Principal Investigator and Joint Principal Investigators of the project	Dr. B. Sutradhar bsutra@ndl.gov.in Prof. Saswat Chakrabarti will be added soon
5	Website/Portal (Helpdesk)	Queries regarding NDLI and its services	support@ndl.gov.in
6	Contents and Copyright Issues	Queries related to content curation and copyright issues	content@ndl.gov.in
7	National Digital Library of India Club (NDLI Club)	Queries related to NDLI Club formation, support, user awareness program, seminar/symposium, collaboration, social media, promotion, and outreach	clubsupport@ndl.gov.in
8	Digital Preservation Centre (DPC)	Assistance with digitizing and archiving copyright-free printed books	dpc@ndl.gov.in
9	IDR Setup or Support	Queries related to establishment and support of Institutional Digital Repository (IDR) and IDR workshops	idr@ndl.gov.in

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