NDLI: Estimation of gene regulatory network by genetic algorithm and pairwise correlation analysis

Content Provider	IEEE Xplore Digital Library
Author	Ando, S. Iba, H.
Copyright Year	2003
Description	Author affiliation: Dept. of Electron. Eng., Tokyo Univ., Japan (Ando, S.; Iba, H.)
Abstract	Constructing genetic network model from microarray data is an important approach to understanding the functions of the genes. Proposed in this paper is the use of pair-wise correlation analysis to capture regulation and co-regulation among genes. It considers pair-wise p-metrics correlation between the expression of the genes and also the change in expression of the genes. The method is used alongside meta heuristic approach to construct gene regulatory networks of difference and differential equation model from microarray data. The evolutionary algorithms are used to find the structure of the model with highest criteria. Using the result of the analysis improves the performance of the meta heuristics and allows us to extract relations from gene expression of E. coli and S. cerevisiae.
Sponsorship	Air Force Iffice of Sci. Res. Asian Office of Aerospace Res and Development Army Res. Office - Far East CISCO Evoluationary Programming Soc. IEE Inst. of Engineers, Australia IEEE Neural Networks Soc. Univ. of New South Wales
Starting Page	207
Ending Page	214
File Size	486834
Page Count	8
File Format	PDF
ISBN	0780378040
DOI	10.1109/CEC.2003.1299576
Language	English
Publisher	Institute of Electrical and Electronics Engineers, Inc. (IEEE)
Publisher Date	2003-12-08
Publisher Place	Australia
Access Restriction	Subscribed
Rights Holder	Institute of Electrical and Electronics Engineers, Inc. (IEEE)
Subject Keyword	Genetic algorithms Pairwise error probability Algorithm design and analysis Gene expression Bayesian methods Data engineering Bioinformatics Power system modeling Predictive models Genetic engineering
Content Type	Text
Resource Type	Article

Sl.	Authority	Responsibilities	Communication Details
1	Ministry of Education (GoI), Department of Higher Education	Sanctioning Authority	https://www.education.gov.in/ict-initiatives
2	Indian Institute of Technology Kharagpur	Host Institute of the Project: The host institute of the project is responsible for providing infrastructure support and hosting the project	https://www.iitkgp.ac.in
3	National Digital Library of India Office, Indian Institute of Technology Kharagpur	The administrative and infrastructural headquarters of the project	Dr. B. Sutradhar bsutra@ndl.gov.in
4	Project PI / Joint PI	Principal Investigator and Joint Principal Investigators of the project	Dr. B. Sutradhar bsutra@ndl.gov.in Prof. Saswat Chakrabarti will be added soon
5	Website/Portal (Helpdesk)	Queries regarding NDLI and its services	support@ndl.gov.in
6	Contents and Copyright Issues	Queries related to content curation and copyright issues	content@ndl.gov.in
7	National Digital Library of India Club (NDLI Club)	Queries related to NDLI Club formation, support, user awareness program, seminar/symposium, collaboration, social media, promotion, and outreach	clubsupport@ndl.gov.in
8	Digital Preservation Centre (DPC)	Assistance with digitizing and archiving copyright-free printed books	dpc@ndl.gov.in
9	IDR Setup or Support	Queries related to establishment and support of Institutional Digital Repository (IDR) and IDR workshops	idr@ndl.gov.in

A Markov-Blanket-Based Model for Gene Regulatory Network Inference

Gene Regulation Network Modeling via Improved Multi-agent System and Dynamic Bayesian Network

A Bayesian network based algorithm for gene regulatory network reconstruction

Causal Modeling of Gene Regulatory Network

Modeling and analysis of gene regulatory networks with a Bayesian-driven approach

Identification of ARMA Models by Bayesian Methods Applied to Streamflow Data

Genetic regulatory networks established by shortest path algorithm and conditional probabilities for ovarian carcinoma microarray data

Gene Regulatory Network Modeling using Bayesian Networks and Cross Correlation

Integrating epigenetic prior in dynamic Bayesian network for gene regulatory network inference

Estimation of gene regulatory network by genetic algorithm and pairwise correlation analysis

Similar Documents

A Markov-Blanket-Based Model for Gene Regulatory Network Inference

Gene Regulation Network Modeling via Improved Multi-agent System and Dynamic Bayesian Network

A Bayesian network based algorithm for gene regulatory network reconstruction

Causal Modeling of Gene Regulatory Network

Modeling and analysis of gene regulatory networks with a Bayesian-driven approach

Identification of ARMA Models by Bayesian Methods Applied to Streamflow Data

Genetic regulatory networks established by shortest path algorithm and conditional probabilities for ovarian carcinoma microarray data

Gene Regulatory Network Modeling using Bayesian Networks and Cross Correlation

Integrating epigenetic prior in dynamic Bayesian network for gene regulatory network inference

Estimation of gene regulatory network by genetic algorithm and pairwise correlation analysis