NDLI: Structure induction by lossless graph compression

Content Provider	IEEE Xplore Digital Library
Author	Peshkin, L.
Copyright Year	2007
Description	Author affiliation: Center for Biomed. Inf., Harvard Med. Sch., Boston, MA (Peshkin, L.)
Abstract	This work is motivated by the necessity to automate the discovery of structure in vast and ever-growing collection of relational data commonly represented as graphs, for example genomic networks. A novel algorithm, dubbed Graphitour, for structure induction by lossless graph compression is presented and illustrated by a clear and broadly known case of nested structure in a DNA molecule. This work extends to graphs some well established approaches to grammatical inference previously applied only to strings. The bottom-up graph compression problem is related to the maximum cardinality (non-bipartite) maximum cardinality matching problem. The algorithm accepts a variety of graph types including directed graphs and graphs with labeled nodes and arcs. The resulting structure could be used for representation and classification of graphs
Starting Page	53
Ending Page	62
File Size	307546
Page Count	10
File Format	PDF
ISBN	0769527914
ISSN	10680314
DOI	10.1109/DCC.2007.73
Language	English
Publisher	Institute of Electrical and Electronics Engineers, Inc. (IEEE)
Publisher Date	2007-03-27
Publisher Place	USA
Access Restriction	Subscribed
Rights Holder	Institute of Electrical and Electronics Engineers, Inc. (IEEE)
Subject Keyword	DNA Proteins Inference algorithms Computer science Production Humans Biomedical informatics Genomics Bioinformatics Explosives
Content Type	Text
Resource Type	Article
Subject	Computer Networks and Communications

Sl.	Authority	Responsibilities	Communication Details
1	Ministry of Education (GoI), Department of Higher Education	Sanctioning Authority	https://www.education.gov.in/ict-initiatives
2	Indian Institute of Technology Kharagpur	Host Institute of the Project: The host institute of the project is responsible for providing infrastructure support and hosting the project	https://www.iitkgp.ac.in
3	National Digital Library of India Office, Indian Institute of Technology Kharagpur	The administrative and infrastructural headquarters of the project	Dr. B. Sutradhar bsutra@ndl.gov.in
4	Project PI / Joint PI	Principal Investigator and Joint Principal Investigators of the project	Dr. B. Sutradhar bsutra@ndl.gov.in Prof. Saswat Chakrabarti will be added soon
5	Website/Portal (Helpdesk)	Queries regarding NDLI and its services	support@ndl.gov.in
6	Contents and Copyright Issues	Queries related to content curation and copyright issues	content@ndl.gov.in
7	National Digital Library of India Club (NDLI Club)	Queries related to NDLI Club formation, support, user awareness program, seminar/symposium, collaboration, social media, promotion, and outreach	clubsupport@ndl.gov.in
8	Digital Preservation Centre (DPC)	Assistance with digitizing and archiving copyright-free printed books	dpc@ndl.gov.in
9	IDR Setup or Support	Queries related to establishment and support of Institutional Digital Repository (IDR) and IDR workshops	idr@ndl.gov.in