NDLI: Enabling proteomics discovery through visual analysis

Content Provider	IEEE Xplore Digital Library
Author	Havre, S.L. Singhal, M. Payne, D.A. Weir Lipton, M.S. Webb-Robertson, B.-J.M.
Copyright Year	1983
Abstract	This article presents the motivation for developing visual analysis tools for proteomic data and demonstrates their application to proteomics research with a visualization tool named Peptide Permutation and Protein Prediction, or PQuad, a functioning visual analytic tool for the study of systems biology, is in operation at the Pacific Northwest National Laboratory (PNNL). PQuad supports the exploration of proteins identified by proteomic techniques in the context of supplemental biological information. In particular, PQuad supports differential proteomics by simplifying the comparison of peptide sets from different experimental conditions as well as different proteins identification or confidence scoring techniques. Finally, PQuad supports data validation and quality control by providing a variety of resolutions for huge amounts of data to reveal errors undetected by other methods.
Page Count	8
File Size	2379375
Starting Page	50
Ending Page	57
File Format	PDF
ISSN	07395175
Volume Number	24
Issue Number	3
Language	English
Publisher	Institute of Electrical and Electronics Engineers, Inc. (IEEE)
Publisher Date	2005-05-01
Publisher Place	U.S.A.
Access Restriction	Subscribed
Rights Holder	Institute of Electrical and Electronics Engineers, Inc. (IEEE)
Subject Keyword	Proteomics Peptides Proteins Amino acids Sequences Genomics Bioinformatics Mass spectroscopy Databases Organisms
Content Type	Text
Resource Type	Article
Subject	Biomedical Engineering

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