NDLI: Machine learning assisted dynamic phenotypes and genomic variants help understand the ecotype divergence in rapeseed

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High seed diversity and availability increase rodent community stability under human disturbance and climate variation

Knockout of a papain-like cysteine protease gene OCP enhances blast resistance in rice

Identification of two quantitative genes controlling soybean flowering using bulked-segregant analysis and genetic mapping

Genetic architecture and candidate gene identification for grain size in bread wheat by GWAS

Resilience of hop (Humulus lupulus L.) to salinity, heat and drought stresses: A mini-review

Metabolomic profiling of developing perilla leaves reveals the best harvest time

Comparative transcriptomic and metabolomic analyses reveal the delaying effect of naringin on postharvest decay in citrus fruit

ERF subfamily transcription factors and their function in plant responses to abiotic stresses

Weed25: A deep learning dataset for weed identification

Citrus green fruit detection via improved feature network extraction

Multi-omics analyses reveal new insights into nutritional quality changes of alfalfa leaves during the flowering period

Selenate and selenite transporters in proso millet: Genome extensive detection and expression studies under salt stress and selenium

Integrated model for genomic prediction under additive and non-additive genetic architecture

Genetic variation in morphological traits in cotton and their roles in increasing phosphorus-use-efficiency in response to low phosphorus availability

Improving bitter pit prediction by the use of X-ray fluorescence (XRF): A new approach by multivariate classification

Does phenotyping of Hypericum secondary metabolism reveal a tolerance to biotic/abiotic stressors?

Predicting common bean (Phaseolus vulgaris) productivity according to Rhizoctonia root and stem rot and weed development at field plot scale

Carbon isotope discrimination as a key physiological trait to phenotype drought/heat resistance of future climate-resilient German winter wheat compared with relative leaf water content and canopy temperature

Identification and utilization of a new Bacillus amyloliquefaciens XY-1 against Fusarium head blight

Optimized potassium application rate increases foxtail millet grain yield by improving photosynthetic carbohydrate metabolism

Feature extraction of 3D Chinese rose model based on color and shape features

A novel elicitor protein phosphopentomutase from Bacillus velezensis LJ02 enhances tomato resistance to Botrytis cinerea

DNA barcoding and biomass accumulation rates of native Iranian duckweed species for biotechnological applications

Genetic requirements for infection-specific responses in conferring disease resistance in Arabidopsis

Insight of PBZ mediated drought amelioration in crop plants

Early damage enhances compensatory responses to herbivory in wild lima bean

Hyperspectral imaging with machine learning for non-destructive classification of Astragalus membranaceus var. mongholicus, Astragalus membranaceus, and similar seeds

Hyperspectral detection of fresh corn peeling damage using germinating sparse classification method

The world’s largest potato cryobank at the International Potato Center (CIP) – Status quo, protocol improvement through large-scale experiments and long-term viability monitoring

Commercial scale genetic transformation of mature seed embryo explants in maize

Bio-fabrication of Zinc Oxide nanoparticles to rescue Mung Bean against Cercospora leaf spot disease

E2Fs co-participate in cadmium stress response through activation of MSHs during the cell cycle

TIR1/AFB proteins: Active players in abiotic and biotic stress signaling

Cotton aphid infestation monitoring using Sentinel-2 MSI imagery coupled with derivative of ratio spectroscopy and random forest algorithm

Arbuscular mycorrhiza induces low oxidative burst in drought-stressed walnut through activating antioxidant defense systems and heat shock transcription factor expression

Effects of green manure planting mode on the quality of Korla fragrant pears (Pyrus sinkiangensis Yu)

Climate change impedes plant immunity mechanisms

Wheat genotypes with higher yield sensitivity to drought overproduced proline and lost minor biomass under severer water stress

Widely targeted metabolomics analysis reveals the mechanism of quality improvement of flue-cured tobacco

A vegetation classification method based on improved dual-way branch feature fusion U-net

Metabolome and transcriptome associated analysis of sesquiterpenoid metabolism in Nardostachys jatamansi

Protocorm-like-body extract of Phalaenopsis aphrodite combats watermelon fruit blotch disease

Interactive responses of root and shoot of camphor tree (Cinnamomum camphora L.) to asymmetric disturbance treatments

Regulation of salt tolerance in the roots of Zea mays by L-histidine through transcriptome analysis

Metabolic profiling on the analysis of different parts of Schisandra chinensis based on UPLC-QTOF-MS with comparative bioactivity assays

Allelopathy and its application as a weed management tool: A review

Molecular and metabolic insights into floral scent biosynthesis during flowering in Dendrobium chrysotoxum

Protective enzyme activity regulation in cotton (Gossypium hirsutum L.) in response to Scirpus planiculmis stress

Novel trifluoromethylpyridine piperazine derivatives as potential plant activators

Diverse mechanisms associated with cyhalofop-butyl resistance in Chinese sprangletop (Leptochloa chinensis (L.) Nees): Characterization of target-site mutations and metabolic resistance-related genes in two resistant populations

Back to the future: Transplanting the chloroplast TrxF–FBPase–SBPase redox system to cyanobacteria

Auxin biosynthesis by Microbacterium testaceum Y411 associated with orchid aerial roots and their efficacy in micropropagation

Chromosome-level genome assembly provides new insights into Japanese chestnut (Castanea crenata) genomes

Processes and mechanisms of vegetation ecosystem responding to climate and ecological restoration in China

Spraying sorbitol-chelated calcium affected foliar calcium absorption and promoted the yield of peanut (Arachis hypogaea L.)

Chitin-induced systemic disease resistance in rice requires both OsCERK1 and OsCEBiP and is mediated via perturbation of cell-wall biogenesis in leaves

Genome−wide identification and analysis of LEA_2 gene family in alfalfa (Medicago sativa L.) under aluminum stress

Sex-specific photosynthetic capacity and Na+ homeostasis in Populus euphratica exposed to NaCl stress and AMF inoculation

Tryptophan synthase ß subunit 1 affects stomatal phenotypes in Arabidopsis thaliana

TeaGVD: A comprehensive database of genomic variations for uncovering the genetic architecture of metabolic traits in tea plants

Physiological basis and differentially expressed genes in the salt tolerance mechanism of Thalassia hemprichii

An integrated physiology, cytology, and proteomics analysis reveals a network of sugarcane protoplast responses to enzymolysis

Response of the wheat mycobiota to flooding revealed substantial shifts towards plant pathogens

Regeneration pattern and genome-wide transcription profile of rhizome axillary buds after perennial rice harvest

Silicon inhibits gummosis by promoting polyamine synthesis and repressing ethylene biosynthesis in peach

Transcriptome and hormone Analyses reveal that melatonin promotes adventitious rooting in shaded cucumber hypocotyls

Genome-wide identification and expression analysis of the GRAS gene family in Dendrobium chrysotoxum

County-scale crop yield prediction by integrating crop simulation with machine learning models

Fhb1 disease resistance QTL does not exacerbate wheat grain protein loss at elevated CO2

Clear phylogeographical structures shed light on the origin and dispersal of the aquatic boreal plant Hippuris vulgaris

Characterization of the antagonistic potential of the glyphosate-tolerant Pseudomonas resinovorans SZMC 25872 strain against the plant pathogenic bacterium Agrobacterium tumefaciens

Evaluation of genome and base editing tools in maize protoplasts

Identification of key genes controlling soluble sugar and glucosinolate biosynthesis in Chinese cabbage by integrating metabolome and genome-wide transcriptome analysis

Comparative transcriptomic profiling of peach and nectarine cultivars reveals cultivar-specific responses to chilled postharvest storage

Effects of chilling on the photosynthetic performance of the CAM orchid Phalaenopsis

Monsoon intensification in East Asia triggered the evolution of its flora

Linkages between stomatal density and minor leaf vein density across different altitudes and growth forms

Corrigendum: Mepiquat chloride inhibits soybean growth but improves drought resistance

Comparative transcriptomic provides novel insights into the soybean response to Colletotrichum truncatum infection

Ectopic overexpression of mulberry MnT5H2 enhances melatonin production and salt tolerance in tobacco

Validation of a high-confidence regulatory network for gene-to-NUE phenotype in field-grown rice

Genome-wide identification, interaction of the MADS-box proteins in Zanthoxylum armatum and functional characterization of ZaMADS80 in floral development

Plant root suberin: A layer of defence against biotic and abiotic stresses

Are cell wall traits a component of the succulent syndrome?

Genetic diversity and structure of Bipolaris oryzae and Exserohilum rostratum populations causing brown spot of rice in Burkina Faso based on genotyping-by-sequencing

Plant community assembly is jointly shaped by environmental and dispersal filtering along elevation gradients in a semiarid area, China

Optimizing maize yields using growth stimulants under the strategy of replacing chemicals with biological fertilizers

Dynamic regulation of phenylpropanoid pathway metabolites in modulating sorghum defense against fall armyworm

Improvement in Brazilian barley breeding: Changes in developmental phases and ecophysiological traits

Eddy covariance measurement-based differences in annual evapotranspiration between forests and grasslands in China

Transcriptomic and splicing changes underlying tomato responses to combined water and nutrient stress

Research on accurate perception and control system of fertilization amount for corn fertilization planter

Development of real-time PCR and droplet digital PCR based marker for the detection of Tilletia caries inciting common bunt of wheat

Corrigendum: Calliterpenone, a natural plant growth promoter from a medicinal plant Callicarpa macrophylla, sustainably enhances the yield and productivity of crops

Enhancing growth and salinity stress tolerance of date palm using Piriformospora indica

Comparative metabolomics provides novel insights into correlation between dominant habitat factors and constituents of Stellaria Radix (Stellaria dichotoma L. var. lanceolata Bge.)

Potential global distribution area projections of the aphid Lipaphis erysimi and its predator Eupeodes corollae in the context of climate change

Sustainable strategies for management of the “false root-knot nematode” Nacobbus spp.

An effective deep learning approach for the classification of Bacteriosis in peach leave

A comparative study on photosynthetic characteristics and flavonoid metabolism between Camellia petelotii (Merr.) Sealy and Camellia impressinervis Chang &Liang

Comparative transcriptome analysis of wheat in response to corn leaf aphid, Rhopalosiphum maidis F. infestation

Chitin amendments eliminate the negative impacts of continuous cropping obstacles on soil properties and microbial assemblage

Continued spring phenological advance under global warming hiatus over the Pan-Third Pole

A high-quality genome assembly and annotation of Quercus acutissima Carruth

Chromatin dynamics associated with seed desiccation tolerance/sensitivity at early germination in Medicago truncatula

Facing energy limitations – approaches to increase basil (Ocimum basilicum L.) growth and quality by different increasing light intensities emitted by a broadband LED light spectrum (400-780 nm)

Functional physiological phenotyping and transcriptome analysis provide new insight into strawberry growth and water consumption

Possible molecular mechanisms of persistent pollen tube growth without de novo transcription

Brassinolide improves the tolerance of Malus hupehensis to alkaline stress

Responses of tree seedlings to understory filtering by the recalcitrant fern layer in a subtropical forest

Corrigendum: Morphological characterization and transcriptome analysis of leaf angle mutant bhlh112 in maize [Zea mays L.]

An increase in livestock density increases forage nutritional value but decreases net primary production and annual forage nutritional yield in the alpine grassland of the Qinghai-Tibetan Plateau

Genome-wide identification, comprehensive characterization of transcription factors, cis-regulatory elements, protein homology, and protein interaction network of DREB gene family in Solanum lycopersicum

AMF colonization affects allelopathic effects of Zea mays L. root exudates and community structure of rhizosphere bacteria

Screening of cold hardiness-related indexes and establishment of a comprehensive evaluation method for grapevines (V. vinifera)

Omics-driven crop potassium use efficiency breeding

Genome-wide identification of YABBY genes in three Cymbidium species and expression patterns in C. ensifolium (Orchidaceae)

Genome-wide characterization of NAC transcription factors in Camellia sinensis and the involvement of CsNAC28 in drought tolerance

Sub-surface drip fertigation improves seed cotton yield and monetary returns

Plant defense under Arctic light conditions: Can plants withstand invading pests?

Editorial: Plant phenology shifts and their ecological and climatic consequences

A novel bacterial strain Burkholderia sp. F25 capable of degrading diffusible signal factor signal shows strong biocontrol potential

Perspectives on the metabolism of strigolactone rhizospheric signals

Untying the Gordian knot of plastid phylogenomic conflict: A case from ferns

Plant leaf veins coupling feature representation and measurement method based on DeepLabV3+

Comparative and phylogenetic analyses of the chloroplast genome reveal the taxonomy of the Morus genus

Whether do plant cells sense nitrate changes without a sensor?

A new NLR disease resistance gene Xa47 confers durable and broad-spectrum resistance to bacterial blight in rice

Mulching in lowland hay meadows drives an adaptive convergence of above- and below-ground traits reducing plasticity and improving biomass: A possible tool for enhancing phytoremediation

The Δ1-pyrroline-5-carboxylate synthetase family performs diverse physiological functions in stress responses in pear (Pyrus betulifolia)

Salicylic acid improves Nasturtium officinale phytoremediation capability for cadmium-contaminated paddy soils

The interaction of ABA and ROS in plant growth and stress resistances

Comparison of the effect of temperature and water potential on the seed germination of five Pedicularis kansuensis populations from the Qinghai–Tibet plateau

The role of nanoparticles in plant biochemical, physiological, and molecular responses under drought stress: A review

Polyphasic study of phytopathogenic bacterial strains associated with deep bark canker of walnut in Serbia revealed a new species, Brenneria izbisi sp. nov

AcBBX5, a B-box transcription factor from pineapple, regulates flowering time and floral organ development in plants

Potential distribution of three types of ephemeral plants under climate changes

Combined physiological and metabolomic analysis reveals the effects of different biostimulants on maize production and reproduction

Nutrient additions to seagrass seed planting improve seedling emergence and growth

Utility of Ugandan genomic selection cassava breeding populations for prediction of cassava viral disease resistance and yield in West African clones

Genome-wide association study reveals quantitative trait loci for waterlogging-triggered adventitious roots and aerenchyma formation in common wheat

HD2A and HD2C co-regulate drought stress response by modulating stomatal closure and root growth in Arabidopsis

USDA’s revised biotechnology regulation’s contribution to increasing agricultural sustainability and responding to climate change

Editorial: Wood decomposition: Mechanisms and prevention strategies

Ascorbate synthesis as an alternative electron source for mitochondrial respiration: Possible implications for the plant performance

Genome-wide analysis of the XTH gene family and functional analysis of DlXTH23.5/25 during early longan somatic embryogenesis

Editorial: AI, sensors and robotics in plant phenotyping and precision agriculture

Silicon supplementation enhances productivity, water use efficiency and salinity tolerance in maize

Yield and quality of alfalfa (Medicago sativa L.) in response to fertilizer application in China: A meta-analysis

Potassium deficiency causes more nitrate nitrogen to be stored in leaves for low-K sensitive sweet potato genotypes

Transfer learning for versatile plant disease recognition with limited data

Assessment of the vegetation sensitivity index in alpine meadows with a high coverage and toxic weed invasion under grazing disturbance

Response of physiological characteristics of ecological restoration plants to substrate cement content under exogenous arbuscular mycorrhizal fungal inoculation

Validation of KASP markers associated with cassava mosaic disease resistance, storage root dry matter and provitamin A carotenoid contents in Ugandan cassava germplasm

ZmnMAT1, a nuclear-encoded type I maturase, is required for the splicing of mitochondrial Nad1 intron 1 and Nad4 intron 2

Identification and characterization of Colletotrichum fioriniae and C. fructicola that cause anthracnose in pecan

An efficient and broadly applicable method for transient transformation of plants using vertically aligned carbon nanofiber arrays

Symptomless turnip yellows virus infection causes grain yield loss in lentil and field pea: A three-year field study in south-eastern Australia

Screening a newly developed common bean germplasm with improved resistance to ashy stem blight in multiple environments

Silicon improves the photosynthetic performance of oat leaves infected with Puccinia graminis f. sp. avenae

Corrigendum: Integrated metabolomics and transcriptomics insights on flavonoid biosynthesis of a medicinal functional forage, Agriophyllum squarrosum (L.), based on a common garden trial covering six ecotypes

Adaptability and stability for soybean yield by AMMI and GGE models in Ethiopia

Co-elevation of atmospheric [CO2] and temperature alters photosynthetic capacity and instantaneous water use efficiency in rice cultivars in a cold-temperate region

Evolutionary history of genus Coptis and its dynamic changes in the potential suitable distribution area

Brittle culm 3, encoding a cellulose synthase subunit 5, is required for cell wall biosynthesis in barley (Hordeum vulgare L.)

Does filter-aided sample preparation provide sufficient method linearity for quantitative plant shotgun proteomics?

Millet-based crop planting strategies in the Songhua River Region during the liaojin (907-1234 AD) dynasties: A case of the Luotong Mountain City site

Leaf rolling in bread wheat (Triticum aestivum L.) is controlled by the upregulation of a pair of closely linked/duplicate zinc finger homeodomain class transcription factors during moisture stress conditions

Phylogenomic resolution of order- and family-level monocot relationships using 602 single-copy nuclear genes and 1375 BUSCO genes

Construction of a density mutant collection in bitter gourd via new germplasms innovation and gene functional study

Genotype determines Arbutus unedo L. physiological and metabolomic responses to drought and recovery

Microtopography mediates the climate–growth relationship and growth resilience to drought of Pinus tabulaeformis plantation in the hilly site

Intercropping with Achyranthes bidentata alleviates Rehmannia glutinosa consecutive monoculture problem by reestablishing rhizosphere microenvironment

Performance of two Ips bark beetles and their associated pathogenic fungi on hosts reflects a species-specific association in the beetle-fungus complex

Mining key genes related to root morphogenesis through genome-wide identification and expression analysis of RR gene family in citrus

CRISPR/Cas9-mediated editing of double loci of BnFAD2 increased the seed oleic acid content of rapeseed (Brassica napus L.)

Rhizosphere microorganisms of Crocus sativus as antagonists against pathogenic Fusarium oxysporum

Oat chromosome and genome evolution defined by widespread terminal intergenomic translocations in polyploids

Evaluation of carbon balance and carbohydrate reserves from forced (Vitis vinifera L.) cv. Tempranillo vines

Shifting sensitivity of septoria tritici blotch compromises field performance and yield of main fungicides in Europe

Transcriptomic and metabolomic analyses reveal the antifungal mechanism of the compound phenazine-1-carboxamide on Rhizoctonia solani AG1IA

Using composite system index to identify China’s ecological and socio-economic transition zone

UV-B induces the expression of flavonoid biosynthetic pathways in blueberry (Vaccinium corymbosum) calli

Sprayer boom height measurement in wheat field using ultrasonic sensor: An exploratory study

Editorial: Innovative use of imaging techniques within plant science

Forage quality and physiological performance of mowed alfalfa (Medicago sativa L.) subjected to combined light quality and drought

Effect of stem structural characteristics and cell wall components related to stem lodging resistance in a newly identified mutant of hexaploid wheat (Triticum aestivum L.)

Design of an efficient combined multipoint picking scheme for tea buds

The Arabidopsis thylakoid chloride channel ClCe regulates ATP availability for light-harvesting complex II protein phosphorylation

Strive or thrive: Trends in Phytophthora capsici gene expression in partially resistant pepper

A colorimetric hydroxy naphthol blue based loop-mediated isothermal amplification detection assay targeting the β-tubulin locus of Sarocladium oryzae infecting rice seed

Genome-wide detection of genotype environment interactions for flowering time in Brassica napus

Kernel color and fertilization as factors of enhanced maize quality

Comparative analysis of medicinal plant Isodon rubescens and its common adulterants based on chloroplast genome sequencing

Untargeted metabolism approach reveals difference of varieties of bud and relation among characteristics of grafting seedlings in Camellia oleifera

Genetic association of spikelet abortion with spike, grain, and shoot traits in highly-diverse six-rowed barley

Comparative and phylogenetic analysis of complete chloroplast genomes from five Artemisia species

Sown alfalfa pasture decreases grazing intensity while increasing soil carbon: Experimental observations and DNDC model predictions

Assessing the heat sensitivity of Urdbean (Vigna mungo L. Hepper) genotypes involving physiological, reproductive and yield traits under field and controlled environment

Identification of a QTL region for ashy stem blight resistance using genome-wide association and linage analysis in common bean recombinant inbred lines derived from BAT 477 and NY6020-4

Influence of organic rice production mode on weed composition in the soil seed bank of paddy fields

Functional characterization of a terpene synthase responsible for (E)-β-ocimene biosynthesis identified in Pyrus betuleafolia transcriptome after herbivory

Using leaf spectroscopy and pigment estimation to monitor indoor grown lettuce dynamic response to spectral light intensity

Genetic dissection of the soybean dwarf mutant dm with integrated genomic, transcriptomic and methylomic analyses

Site characteristics determine the effectiveness of tillage and cover crops on the net ecosystem carbon balance in California vineyard agroecosystems

Genome-wide survey of Calcium-Dependent Protein Kinases (CPKs) in five Brassica species and identification of CPKs induced by Plasmodiophora brassicae in B. rapa, B. oleracea, and B. napus

Plant growth forms dictate adaptations to the local climate

Calcium peroxide alleviates the waterlogging stress of rapeseed by improving root growth status in a rice-rape rotation field

SWATH-MS based quantitative proteomics analysis reveals novel proteins involved in PAMP triggered immunity against potato late blight pathogen Phytophthora infestans

Deciphering the mitochondrial genome of Hemerocallis citrina (Asphodelaceae) using a combined assembly and comparative genomic strategy

Natural products as sources of acetylcholinesterase inhibitors: Synthesis, biological activities, and molecular docking studies of osthole-based ester derivatives

Phytotoxic, insecticidal, and antimicrobial activities of Ajania tibetica essential oil

AI-based object detection latest trends in remote sensing, multimedia and agriculture applications

Frequent spontaneous structural rearrangements promote rapid genome diversification in a Brassica napus F1 generation

Understanding plant–microbe interaction of rice and soybean with two contrasting diazotrophic bacteria through comparative transcriptome analysis

QTL mapping reveals candidate genes for main agronomic traits in Luffa based on a high-resolution genetic map

Editorial: Convolutional neural networks and deep learning for crop improvement and production

Seed size, endosperm and germination variation in sexual and apomictic Boechera

Is foliar tissue drying and grinding required for reliable and reproducible extraction of total inorganic nutrients? A comparative study of three tissue preparation methods

Compared analysis with a high-quality genome of weedy rice reveals the evolutionary game of de-domestication

LettuceMOT: A dataset of lettuce detection and tracking with re-identification of re-occurred plants for agricultural robots

Citrus Huanglongbing correlated with incidence of Diaphorina citri carrying Candidatus Liberibacter asiaticus and citrus phyllosphere microbiome

Functional characterization of the sugarcane (Saccharum spp.) ammonium transporter AMT2;1 suggests a role in ammonium root-to-shoot translocation

High temperature boosts resistant starch content by altering starch structure and lipid content in rice ssIIIa mutants

Genome-wide characterization of PEBP gene family in Perilla frutescens and PfFT1 promotes flowering time in Arabidopsis thaliana

Corrigendum: Small secreted peptides encoded on the wheat (Triticum aestivum L.) genome and their potential roles in stress responses

A mass spectrometry imaging approach on spatiotemporal distribution of multiple alkaloids in Gelsemium elegans

Sustainable Cannabis Nutrition: Elevated root-zone phosphorus significantly increases leachate P and does not improve yield or quality

Corrigendum: Glutathione and copper ions as critical factors of green plant regeneration efficiency of triticale in vitro anther culture

Internal freezing and heat loss of apple (Malus domestica Borkh.) and sweet cherry (Prunus avium L.) reproductive buds are decreased with cellulose nanocrystal dispersions

Integrating transcriptomic and metabolomic analysis in roots of wild soybean seedlings in response to low-phosphorus stress

A non-destructive testing method for early detection of ginseng root diseases using machine learning technologies based on leaf hyperspectral reflectance

Comprehensive analysis of the NAC transcription factor gene family in Kandelia obovata reveals potential members related to chilling tolerance

Application of crop wild relatives in modern breeding: An overview of resources, experimental and computational methodologies

Deciphering the role of endophytic microbiome in postharvest diseases management of fruits: Opportunity areas in commercial up-scale production

Single-cell transcriptome sequencing revealing the difference in photosynthesis and carbohydrate metabolism between epidermal cells and non-epidermal cells of Gracilariopsis lemaneiformis (Rhodophyta)

Mining for salt-tolerant genes from halophyte Zoysia matrella using FOX system and functional analysis of ZmGnTL

(Don’t) Look Up!: Is short-root just a short‐root plant?

Identification and validation of quantitative trait loci for chlorophyll content of flag leaf in wheat under different phosphorus treatments

The Medicago truncatula hydrolase MtCHIT5b degrades Nod factors of Sinorhizobium meliloti and cooperates with MtNFH1 to regulate the nodule symbiosis

In silico evidence for the utility of parsimonious root phenotypes for improved vegetative growth and carbon sequestration under drought

Postharvest physiology and biochemistry of Valencia orange after coatings with chitosan nanoparticles as edible for green mold protection under room storage conditions

Elevated CO2 enhanced water use efficiency of wheat to progressive drought stress but not on maize

Regulating carbon and water balance as a strategy to cope with warming and drought climate in Cunninghamia lanceolata in southern China

Corrigendum: Tartary buckwheat FtF3′H1 as a metabolic branch switch to increase anthocyanin content in transgenic plant

Establishment of in vitro regeneration system and molecular analysis of early development of somatic callus in Capsicum chinense and Capsicum baccatum

Models of mycorrhizal colonization patterns and strategies induced by biostimulator treatments in Zea mays roots

MINI BODY1, encoding a MATE/DTX family transporter, affects plant architecture in mungbean (Vigna radiata L.)

Physiology of microalgae and their application to sustainable agriculture: A mini-review

Characterization of the genetic and regulatory networks associated with sugar and acid metabolism in apples via an integrated strategy

Cotton proteomics: Dissecting the stress response mechanisms in cotton

Comparative genomic analysis of the aldehyde dehydrogenase gene superfamily in Arabidopsis thaliana – searching for the functional key to hypoxia tolerance

Shading decreases lodging resistance of wheat under different planting densities by altering lignin monomer composition of stems

Lexicon and attention-based named entity recognition for kiwifruit diseases and pests: A Deep learning approach

Pantranscriptome combined with phenotypic quantification reveals germplasm kinship and regulation network of bract color variation in Bougainvillea

Integrated transcriptomic and metabolic analyses provide insights into the maintenance of embryogenic potential and the biosynthesis of phenolic acids and flavonoids involving transcription factors in Larix kaempferi (Lamb.) Carr.

Pseudopollen in Camellia oleifera and its implications for pollination ecology and taxonomy

Argonaute5 and its associated small RNAs modulate the transcriptional response during the rhizobia-Phaseolus vulgaris symbiosis

Occurrence of simple sequence repeats in cDNA sequences of safflower (Carthamus tinctorius) reveals the importance of SSR-containing genes for cell biology and dynamic response to environmental cues

Integrated physiological and weighted gene co-expression network analysis reveals the hub genes engaged in nitrate-regulated alleviation of ammonium toxicity at the seedling stage in wheat (Triticum aestivum L.)

Genome-guided comparative in planta transcriptome analyses for identifying cross-species common virulence factors in bacterial phytopathogens

Photosynthetic and yield responses of rotating planting strips and reducing nitrogen fertilizer application in maize–peanut intercropping in dry farming areas

Foliar spray of silica improved water stress tolerance in rice (Oryza sativa L.) cultivars

Editorial: Multi-omics and computational biology in horticultural plants: From genotype to phenotype

Assembly and comparative analysis of the complete mitochondrial genome of Salix wilsonii using PacBio HiFi sequencing

Editorial: Induced resistance and priming against pests and pathogens

Screening for broad-spectrum antimicrobial endophytes from Rosa roxburghii and multi-omic analyses of biosynthetic capacity

‘Root of all success’: Plasticity in root architecture of invasive wild radish for adaptive benefit

Mapping open chromatin by ATAC-seq in bread wheat

Revealing the mechanisms of the bioactive ingredients accumulation in Polygonatum cyrtonema by multiomics analyses

Efficient virus-mediated genome editing in cotton using the CRISPR/Cas9 system

Local auxin synthesis mediated by YUCCA4 induced during root-knot nematode infection positively regulates gall growth and nematode development

Contrasting distribution of enzyme activities in the rhizosphere of European beech and Norway spruce

Induction of salt tolerance in Brassica rapa by nitric oxide treatment

Effect of intermittent shade on nitrogen dynamics assessed by 15N trace isotopes, enzymatic activity and yield of Brassica napus L.

Ericoid mycorrhizal fungi as biostimulants for improving propagation and production of ericaceous plants

Weed suppression and antioxidant activity of Astragalus sinicus L. decomposition leachates

Screening of short-day onions for resistance to Stemphylium leaf blight in the seed-to-bulb stage (stage I) and bulb-to-seed stage (stage II)

A meta-quantitative trait loci analysis identified consensus genomic regions and candidate genes associated with grain yield in rice

Co-expression of stress-responsive regulatory genes, MuNAC4, MuWRKY3 and MuMYB96 associated with resistant-traits improves drought adaptation in transgenic groundnut (Arachis hypogaea l.) plants

Comparative analysis of farmer practices and high yield experiments: Farmers could get more maize yield from maize-soybean relay intercropping through high density cultivation of maize

Nutritional anti-nutritional chemical composition and antioxidant activities of the leaves of the sea cliff dwelling species Limonium spathulatum (Desf.) Kuntze

Editorial: Plant specialized metabolism for plant protection: Genomics and biotechnology

Altering the balance between AOX1A and NDB2 expression affects a common set of transcripts in Arabidopsis

Machine learning assisted dynamic phenotypes and genomic variants help understand the ecotype divergence in rapeseed

Nitrogen fertilizer application rates and ratios promote the biochemical and physiological attributes of winter wheat

QTL analysis identified two major all-internodes solidness loci from a completely solid-stemmed spring wheat line

Potential allopolyploid origin of Ericales revealed with gene-tree reconciliation

Polyphenolics, glucosinolates and isothiocyanates profiling of aerial parts of Nasturtium officinale (Watercress)

Cotton straw biochar and compound Bacillus biofertilizer reduce Cd stress on cotton root growth by regulating root exudates and antioxidant enzymes system

Integrative application of heavy metal–resistant bacteria, moringa extracts, and nano-silicon improves spinach yield and declines its contaminant contents on a heavy metal–contaminated soil

Multi-omics analysis the differences of VOCs terpenoid synthesis pathway in maintaining obligate mutualism between Ficus hirta Vahl and its pollinators

Editorial: Genomics and disease resistance in wheat and maize

A naturally-occurring phenomenon of flower color change during flower development in Xanthoceras sorbifolium

Multiplex CRISPR/Cas9-mediated raffinose synthase gene editing reduces raffinose family oligosaccharides in soybean

Modified screening method of middle american dry bean genotypes reveals new genomic regions on Pv10 associated with anthracnose resistance

Editorial: New insights into salinity sensing, signaling and adaptation in plants, volume II

Role of long non-coding RNAs in rice reproductive development

Genetic diversity pattern reveals the primary determinant of burcucumber (Sicyos angulatus L.) invasion in Korea

DhMYB2 and DhbHLH1 regulates anthocyanin accumulation via activation of late biosynthesis genes in Phalaenopsis-type Dendrobium

Metabolome and transcriptome integration reveals insights into the process of delayed petal abscission in rose by STS

Effects of low temperature on flowering and the expression of related genes in Loropetalum chinense var. rubrum

Editorial: Regulation of proteolysis and proteome composition in plant response to environmental stress

Comparing adventitious root-formation and graft-unification abilities in clones of Argania spinosa

Influence of multiple global change drivers on plant invasion: Additive effects are uncommon

Multiple ALMT subunits combine to form functional anion channels: A case study for rice ALMT7

Genome-wide transcriptome profiling revealed biological macromolecules respond to low temperature stress in Brassica napus L

Genetic mapping of the Andean anthracnose resistance gene present in the common bean cultivar BRSMG Realce

Editorial: Chlorophyll fluorescence analysis in biotic and abiotic stress, volume II

Adaptive divergence for a drought resistance related trait among invasive Saltcedar (Tamarix L.) populations in southwestern US: Inferences from QCT - FCT

Come together now: Dynamic body-formation of key regulators integrates environmental cues in plant development

Untargeted metabolomic profiling of fresh and dried leaf extracts of young and mature Eucalyptus globulus trees indicates differences in the presence of specialized metabolites

CGIAR Barley Breeding Toolbox: A diversity panel to facilitate breeding and genomic research in the developing world

Morphological characteristics of seed starch granules of Fagaceae in South China and their implication in paleodiet

Genome-wide association studies for soybean epicotyl length in two environments using 3VmrMLM

The discovery of a key prenyltransferase gene assisted by a chromosome-level Epimedium pubescens genome

Enhanced nitrogen use efficiency, growth and yield of wheat through soil urea hydrolysis inhibition by Vachellia nilotica extract

Editorial: Secondary metabolism and fruit quality

Overexpression of TaMYC2 confers freeze tolerance by ICE-CBF-COR module in Arabidopsis thaliana

PIN1 regulates epidermal cells development under drought and salt stress using single-cell analysis

Genome-partitioning strategy, plastid and nuclear phylogenomic discordance, and its evolutionary implications of Clematis (Ranunculaceae)

Multi-trait selection for mean performance and stability of maize hybrids in mega-environments delineated using envirotyping techniques

Salix gordejevii females exhibit more resistance against wind erosion than males under aeolian environment

Ethylene: Management and breeding for postharvest quality in vegetable crops. A review

Gibberellin delays metabolic shift during tomato ripening by inducing auxin signaling

Five new secondary metabolites from an endophytic fungus Phomopsis sp. SZSJ-7B

Rhodospirillum sp. JY3: An innovative tool to mitigate the phytotoxic impact of galaxolide on wheat (Triticum aestivum) and faba bean (Vicia faba) plants

Nitrogen addition promotes early-stage and inhibits late-stage decomposition of fine roots in Pinus massoniana plantation

Precipitation predictability affects intra- and trans-generational plasticity and causes differential selection on root traits of Papaver rhoeas

Editorial: Advances in grapevine genetic improvement: Towards high quality, sustainable grape production

Editorial: Beneficial effects of fungal endophytes in major agricultural crops

Transcriptomic analysis reveals the contribution of QMrl-7B to wheat root growth and development

Building a foundation for gene family analysis in Rosaceae genomes with a novel workflow: A case study in Pyrus architecture genes

Cotton leaf curl Multan virus differentially regulates innate antiviral immunity of whitefly (Bemisia tabaci) vector to promote cryptic species-dependent virus acquisition

Proteomic responses of two spring wheat cultivars to the combined water deficit and aphid (Metopolophium dirhodum) treatments

Simulation the potential distribution of Dendrolimus houi and its hosts, Pinus yunnanensis and Cryptomeria fortunei, under climate change in China

Information on disease resistance patterns of grape varieties may improve disease management

Effects of trichothecene production by Trichoderma arundinaceum isolates from bean-field soils on the defense response, growth and development of bean plants (Phaseolus vulgaris)

Managingtomato bacterial wilt by suppressing Ralstonia solanacearum population in soil and enhancing host resistance through fungus-derived furoic acid compound

GmTOC1b inhibits nodulation by repressing GmNIN2a and GmENOD40-1 in soybean

Biological nitrification inhibitor-trait enhances nitrogen uptake by suppressing nitrifier activity and improves ammonium assimilation in two elite wheat varieties

Revealing seed color variation and their possible association with yield and quality traits in a diversity panel of flax (Linum Usitatissimum L.)

A banana transcriptional repressor MaAP2a participates in fruit starch degradation during postharvest ripening

Identification of GOLDEN2-like transcription factor genes in soybeans and their role in regulating plant development and metal ion stresses

Arbuscular mycorrhizal fungi in the soil using cover crops with and without nitrogen addition

Nitrogen isotope discrimination in open-pollinated and hybrid canola suggests indirect selection for enhanced ammonium utilization

Genetic background- and environment-independent QTL and candidate gene identification of appearance quality in three MAGIC populations of rice

Development of the maize 5.5K loci panel for genomic prediction through genotyping by target sequencing

Predicting spatial variability of species diversity with the minimum data set of soil properties in an arid desert riparian forest

Reactive oxygen species-related genes participate in resistance to cucumber green mottle mosaic virus infection regulated by boron in Nicotiana benthamiana and watermelon

Essential oil from Sabina chinensis leaves: A promising green control agent against Fusarium sp.

An Asp376Glu substitution in ALS gene and enhanced metabolism confers high tribenuron-methyl resistance in Sinapis alba

EBE-YOLOv4: A lightweight detecting model for pine cones in forest

Presequence translocase-associated motor subunits of the mitochondrial protein import apparatus are dual-targeted to mitochondria and plastids

Carbon monoxide promotes stomatal initiation by regulating the expression of two EPF genes in Arabidopsis cotyledons

A story of resilience: Arctic diatom Chaetoceros gelidus exhibited high physiological plasticity to changing CO2 and light levels

Responses of carbon dynamics to grazing exclusion in natural alpine grassland ecosystems on the QingZang Plateau

Photorespiration in eelgrass (Zostera marina L.): A photoprotection mechanism for survival in a CO2-limited world

Phytolith occluded organic carbon in Fagopyrum (Polygonaceae) plants: Insights on the carbon sink potential of cultivated buckwheat planting

Regulatory non-coding RNAs: Emerging roles during plant cell reprogramming and in vitro regeneration

Discovery and exploration of widespread infection of mycoviruses in Phomopsis vexans, the causal agent of phomopsis blight of eggplant in China

Rapid nondestructive detection of peanut varieties and peanut mildew based on hyperspectral imaging and stacked machine learning models

Establishment and optimization of a new model organism to study early land plant evolution: Germination, cultivation and oospore variation of Chara braunii Gmelin, 1826

A plant growth-promoting bacteria Priestia megaterium JR48 induces plant resistance to the crucifer black rot via a salicylic acid-dependent signaling pathway

Variations in genetic diversity in cultivated Pistacia chinensis

A graph-based approach for simultaneous semantic and instance segmentation of plant 3D point clouds

LjNRT2.3 plays a hierarchical role in the control of high affinity transport system for root nitrate acquisition in Lotus japonicus

Tissue culture coupled with a gas exchange system offers new perspectives on phenotyping the developmental biology of Solanum lycopersicum L. cv. ‘MicroTom’

Potential global geographical distribution of Lolium temulentum L. under climate change

Molecular mechanism of Cu metal and drought stress resistance triggered by Porostereum spadiceum AGH786 in Solanum lycopersicum L.

Stronger wind, smaller tree: Testing tree growth plasticity through a modeling approach

Global analysis of common bean multidrug and toxic compound extrusion transporters (PvMATEs): PvMATE8 and pinto bean seed coat darkening

Herbicide resistance in grass weeds: Epigenetic regulation matters too

Editorial: Monocot phylogenetics and trait evolution

SmDXS5, acting as a molecular valve, plays a key regulatory role in the primary and secondary metabolism of tanshinones in Salvia miltiorrhiza

Identification and differential analysis of noncoding RNAs in response to drought in Phyllostachys aureosulcata f. spectabilis

Effect of different waterlogging periods on biochemistry, growth, and chlorophyll a fluorescence of Arachis hypogaea L.

Nicotiana benthamiana Kunitz peptidase inhibitor-like protein involved in chloroplast-to-nucleus regulatory pathway in plant-virus interaction

Transcription level differences in Taxus wallichiana var. mairei elicited by Ce3+, Ce4+ and methyl jasmonate

Flavonoids and Devosia sp SL43 cell-free supernatant increase early plant growth under salt stress and optimal growth conditions

Identification of plant leaf diseases by deep learning based on channel attention and channel pruning

Assessing performance and stability of yellow rust resistance, heat tolerance, and agronomic performance in diverse bread wheat genotypes for enhancing resilience to climate change under Egyptian conditions

Plant disease symptom segmentation in chlorophyll fluorescence imaging with a synthetic dataset

Genome-wide identification of the KNOTTED HOMEOBOX gene family and their involvement in stalk development in flowering Chinese cabbage

Quercetin ameliorates chromium toxicity through improvement in photosynthetic activity, antioxidative defense system; and suppressed oxidative stress in Trigonella corniculata L.

Nickel toxicity alters growth patterns and induces oxidative stress response in sweetpotato

Green synthesis and application of GO nanoparticles to augment growth parameters and yield in mungbean (Vigna radiata L.)

Mechanisms involved in drought stress tolerance triggered by rhizobia strains in wheat

Impact of single biochar application on maize growth and water-fertilizer productivity under different irrigation regimes

Novel candidate loci for morpho-agronomic and seed quality traits detected by targeted genotyping-by-sequencing in common bean

QTL analysis of tuber shape in a diploid potato population

Effects of agronomic traits and climatic factors on yield and yield stability of summer maize (Zea mays L) in the Huang-Huai-Hai Plain in China

Quantitative trait locus mapping and improved resistance to sclerotinia stem rot in a backbone parent of rapeseed (Brassica napus L.)

Identification of Brachypodium distachyon B3 genes reveals that BdB3-54 regulates primary root growth

Measurement of morphological changes of pear leaves in airflow based on high-speed photography

Exploring and exploiting cuticle biosynthesis for abiotic and biotic stress tolerance in wheat and barley

Photosynthetic performance and nutrient uptake under salt stress: Differential responses of wheat plants to contrasting phosphorus forms and rates

The end-use quality of wheat can be enhanced by optimal water management without incurring yield loss

Artemisia argyi water extract promotes selenium uptake of peach seedlings

Field application of silicon alleviates drought stress and improves water use efficiency in wheat

Phenolic profiles and antioxidant activity in different organs of Sinopodophyllum hexandrum

A lipidomics platform to analyze the fatty acid compositions of non-polar and polar lipid molecular species from plant tissues: Examples from developing seeds and seedlings of pennycress (Thlaspi arvense)

Comparative phylogenomic analyses and co-expression gene network reveal insights in flowering time and aborted meiosis in woody bamboo, Bambusa oldhamii ‘Xia Zao’ ZSX

Root colonization by the endophytic fungus Piriformospora indica shortens the juvenile phase of Piper nigrum L. by fine tuning the floral promotion pathways

Enhancement of cucumber resistance under salt stress by 2, 4-epibrassinolide lactones

Plant responses to high temperature and drought: A bibliometrics analysis

Unlocking the hidden variation from wild repository for accelerating genetic gain in legumes

Biostimulation can prime elicitor induced resistance of grapevine leaves to downy mildew

Overexpression of dihydroflavonol 4-reductase (CoDFR) boosts flavonoid production involved in the anthracnose resistance

Increasing connections among temporal invariability, resistance and resilience of alpine grasslands on the Tibetan Plateau

Transcriptome profiling revealed salt stress-responsive genes in Lilium pumilum bulbs

Research on weed identification method in rice fields based on UAV remote sensing

In vivo structural modification of type II arabinogalactans with fungal endo-β-1, 6-galactanase in Arabidopsis

Characterization and selection of endophytic actinobacteria for growth and disease management of Tea (Camellia sinensis L.)

Straw incorporation and nitrogen reduction effect on the uptake and use efficiency of nitrogen as well as soil CO2 emission of relay strip intercropped soybean

Electrochemical fingerprinting sensor for plant phylogenetic investigation: A case of sclerophyllous oak

Cleaner production technologies for the amelioration of soil health, biomass and secondary metabolites in Ocimum basilicum L. under Indian Western Himalaya

A putative 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase is involved in the virulence, carbohydrate metabolism, biofilm formation, twitching halo, and osmotic tolerance in Acidovorax citrulli

Editorial: Recent advances on grapevine-microbe interactions: From signal perception to resistance response, volume II

Multiomics analysis elucidated molecular mechanism of aromatic amino acid biosynthesis in Akebia trifoliata fruit

Semi-supervised wildfire smoke detection based on smoke-aware consistency

TMT proteomics analysis of a pseudocereal crop, quinoa (Chenopodium quinoa Willd.), during seed maturation

Gall-specific promoter, an alternative to the constitutive CaMV35S promoter, drives host-derived RNA interference targeting Mi-msp2 gene to confer effective nematode resistance

Linking leaf economic and hydraulic traits with early-age growth performance and survival of Eucalyptus pauciflora

Transcriptome and metabolome analyses reveal phenotype formation differences between russet and non-russet apples

Versatile role of Pseudomonas fuscovaginae cyclic lipopeptides in plant and microbial interactions

Pomelo seed oil: Natural insecticide against cowpea aphid

Challenges and advances in measuring sap flow in agriculture and agroforestry: A review with focus on nuclear magnetic resonance

Bioorganic fertilizer promotes pakchoi growth and shapes the soil microbial structure

Plant-based expression platforms to produce high-value metabolites and proteins

The effect of circular soil biosolarization treatment on the physiology, metabolomics, and microbiome of tomato plants under certain abiotic stresses

Response of root and root hair phenotypes of cotton seedlings under high temperature revealed with RhizoPot

Comprehensive analysis of glycerolipid dynamics during tobacco pollen germination and pollen tube growth

Genetically engineered crops for sustainably enhanced food production systems

WRKY transcription factors (TFs): Molecular switches to regulate drought, temperature, and salinity stresses in plants

Predicting starch content in cassava fresh roots using near-infrared spectroscopy

Knockdown of NtCPS2 promotes plant growth and reduces drought tolerance in Nicotiana tabacum

Effect of the At-CDC27a gene on Nicotiana benthamiana phenotype and accumulation of recombinant proteins

Exon skipping in IspE Gene is associated with abnormal chloroplast development in rice albino leaf 4 mutant

Flexible response and rapid recovery strategies of the plateau forage Poa crymophila to cold and drought

Model construction and validation of airflow velocity attenuation through pear tree canopies

Near-infrared hyperspectral imaging for online measurement of the viability detection of naturally aged watermelon seeds

Universal detection of curved rice panicles in complex environments using aerial images and improved YOLOv4 model

Maximizing genetic gain through unlocking genetic variation in different ecotypes of kalmegh (Andrographis paniculata (Burm. f.) Nee)

The bZIP transcription factors in Liriodendron chinense: Genome-wide recognition, characteristics and cold stress response

Genome-wide characterization of the chitinase gene family in wild apple (Malus sieversii) and domesticated apple (Malus domestica) reveals its role in resistance to Valsa mali

Transcriptome analysis identifies key gene LiMYB305 involved in monoterpene biosynthesis in Lilium ‘Siberia’

Puccinia striiformis f. sp. tritici effectors in wheat immune responses

Regulation of Na+/H+ exchangers, Na+/K+ transporters, and lignin biosynthesis genes, along with lignin accumulation, sodium extrusion, and antioxidant defense, confers salt tolerance in alfalfa

Physiological effects of γ-aminobutyric acid application on cold tolerance in Medicago ruthenica

Screening and characterization estrogen receptor ligands from Arnebia euchroma (Royle) Johnst. via affinity ultrafiltration LC-MS and molecular docking

Changes in root chemical diversity along an elevation gradient of Changbai Mountain, China

Plastid and cytoplasmic origins of 1O2-mediated transcriptomic responses

Explore the interaction between root metabolism and rhizosphere microbiota during the growth of Angelica sinensis

A tale of two metals: Biofortification of rice grains with iron and zinc

Key role of reactive oxygen species-scavenging system in nitric oxide and hydrogen sulfide crosstalk-evoked thermotolerance in maize seedlings

Optimization and identification of siderophores produced by Pseudomonas monteilii strain MN759447 and its antagonism toward fungi associated with mortality in Dalbergia sissoo plantation forests

Genome-wide association studies of five free amino acid levels in rice

Seedling maize counting method in complex backgrounds based on YOLOV5 and Kalman filter tracking algorithm

Mechanistic insights derived from re-establishment of desiccation tolerance in germinating xerophytic seeds: Caragana korshinskii as an example

Exogenous nitric oxide promotes salinity tolerance in plants: A meta-analysis

Arbuscular mycorrhiza mitigates zinc stress on Eucalyptus grandis through regulating metal tolerance protein gene expression and ionome uptake

Long-term water use efficiency and non-structural carbohydrates of dominant tree species in response to nitrogen and water additions in a warm temperate forest

Molecular manipulations of miR398 increase rice grain yield under different conditions

A novel heuristic target-dependent neural architecture search method with small samples

Overexpression of Pyrus sinkiangensis HAT5 enhances drought and salt tolerance, and low-temperature sensitivity in transgenic tomato

Multispecies transcriptomes reveal core fruit development genes

Effects of post-silking low temperature on the starch and protein metabolism, endogenous hormone contents, and quality of grains in waxy maize

A comparison of classical and machine learning-based phenotype prediction methods on simulated data and three plant species

YOLOX-based blue laser weeding robot in corn field

Editorial: Spectroscopy for crop and product phenotyping

Is there a specific calcium signal out there to decode combined biotic stress and temperature elevation?

Establishment of discrete element flexible model of the tiller taro plant and clamping and pulling experiment

Identification of elite fiber quality loci in upland cotton based on the genotyping-by-target-sequencing technology

Genome and transcriptome-wide study of carbamoyltransferase genes in major fleshy fruits: A multi-omics study of evolution and functional significance

Callus induction and transcriptomic analysis of in vitro embryos at different developmental stages of peony

Evolutionary history and patterns of geographical variation, fertility, and hybridization in Stuckenia (Potamogetonaceae)

The heat shock factor GhHSFA4a positively regulates cotton resistance to Verticillium dahliae

Plastaumatic: Automating plastome assembly and annotation

Genome-wide identification and functional analysis of Cellulose synthase gene superfamily in Fragaria vesca

Insights into melatonin-induced photosynthetic electron transport under low-temperature stress in cucumber

Genetic studies on continuous flowering in woody plant Osmanthus fragrans

Functional study of CYP90A1 and ALDH3F1 gene obtained by transcriptome sequencing analysis of Brassica napus seedlings treated with brassinolide

Genetic diversity and phylogeography of the endemic species Chimonobambusa utilis growing in southwest China: Chloroplast DNA sequence and microsatellite marker analyses

Effects of seasonal grazing on plant and soil microbial diversity of typical temperate grassland

Down-regulation of NCED leads to the accumulation of carotenoids in the flesh of F1 generation of peach hybrid

PacBio full-length sequencing integrated with RNA-seq reveals the molecular mechanism of waterlogging and its recovery in Paeonia ostii

Identification and comprehensive analysis of MIPSs in Rosaceae and their expression under abiotic stresses in rose (Rosa chinensis)

Better tolerance to Huanglongbing is conferred by tetraploid Swingle citrumelo rootstock and is influenced by the ploidy of the scion

Transcriptome and metabolome analyses of Shatian pomelo (Citrus grandis var. Shatinyu Hort) leaves provide insights into the overexpression of the gibberellin-induced gene CcGASA4

Genome-wide characterization of AINTEGUMENTA-LIKE family in Medicago truncatula reveals the significant roles of AINTEGUMENTAs in leaf growth

Experimental duration determines the effect of arbuscular mycorrhizal fungi on plant biomass in pot experiments: A meta-analysis

Climate change conditions the selection of rust-resistant candidate wild lentil populations for in situ conservation

Temporal heterogeneity in photosystem II photochemistry in Artemisia ordosica under a fluctuating desert environment

The gastrodin biosynthetic pathway in Pholidota chinensis Lindl. revealed by transcriptome and metabolome profiling

Genome-wide analysis of the WOX gene family and the role of EjWUSa in regulating flowering in loquat (Eriobotrya japonica)

Cytological observation and transcriptome analysis reveal dynamic changes of Rhizoctonia solani colonization on leaf sheath and different genes recruited between the resistant and susceptible genotypes in rice

Transcriptional and biochemical profiling of defense enzymes in Citrus sinensis during salicylic acid and cinnamon mediated suppression of green and blue mold

Exploration of the genomic atlas of Dof transcription factor family across genus Oryza provides novel insights on rice breeding in changing climate

The effects of previous summer drought and fertilization on winter non-structural carbon reserves and spring leaf development of downy oak saplings

Editorial: On the frontier of a plant’s dilemma: Exploring the molecular basis ofgrowth versus defense antagonism

Additive effects of warming and nitrogen addition on the performance and competitiveness of invasive Solidago canadensis L.

A poisoned apple: First insights into community assembly and networks of the fungal pathobiome of healthy-looking senescing leaves of temperate trees in mixed forest ecosystem

ResNet and MaxEnt modeling for quality assessment of Wolfiporia cocos based on FT-NIR fingerprints

Rice and millet cultivated in Ha Long Bay of Northern Vietnam 4000 years ago

Precipitation increase counteracts warming effects on plant and soil C:N:P stoichiometry in an alpine meadow

Genome-wide identification and expression analysis of MIKCC genes in rose provide insight into their effects on flower development

Plastid phylogenomics and morphological character evolution of Chloridoideae (Poaceae)

Is allelochemical synthesis in Casuarina equisetifolia plantation related to litter microorganisms?

A histone deacetylase inhibitor enhances rice immunity by derepressing the expression of defense-related genes

Improving productivity of Sesbania pea in saline soils by enhancing antioxidant capacity with optimum application of nitrogen and phosphate combination

A PacBio single molecule real-time sequencing-based full-length transcriptome atlas of tree tomato (Solanum betaceum Cav.) and mining of simple sequence repeat markers

Role of Nanoparticles in Enhancing Crop Tolerance to Abiotic Stress: A Comprehensive Review

Greenhouse gas emissions and carbon footprint of collard greens, spinach and chicory production systems in Southeast of Brazil

Identification and investigation of a novel NADP+-dependent secoisolariciresinol dehydrogenase from Isatis indigotica

Quantitative proteomics analysis of tomato root cell wall proteins in response to salt stress

Genome-wide association study reveals a GLYCOGEN SYNTHASE KINASE 3 gene regulating plant height in Brassica napus

Genome mining reveals abiotic stress resistance genes in plant genomes acquired from microbes via HGT

Dilated convolution capsule network for apple leaf disease identification

Titanium nanoparticles activate a transcriptional response in Arabidopsis that enhances tolerance to low phosphate, osmotic stress and pathogen infection

Cytogenetic identification and molecular marker development of a novel wheat-Leymus mollis 4Ns(4D) alien disomic substitution line with resistance to stripe rust and Fusarium head blight

Genetic mapping revealed that the Pun2 gene in Capsicum chacoense encodes a putative aminotransferase

Genome-wide identification and expression analysis of the MADS-box gene family during female and male flower development in Juglans mandshurica

Maize/soybean strip intercropping produces higher crop yields and saves water under semi-arid conditions

Tap the sap – investigation of latex-bearing plants in the search of potential anticancer biopharmaceuticals

Sprayed biodegradable liquid film improved the freezing tolerance of cv. Cabernet Sauvignon by up-regulating soluble protein and carbohydrate levels and alleviating oxidative damage

Nitric oxide: A core signaling molecule under elevated GHGs (CO2, CH4, N2O, O3)-mediated abiotic stress in plants

Niche divergence at the intraspecific level in an endemic rare peony (Paeonia rockii): A phylogenetic, climatic and environmental survey

Candidate gene discovery for salt tolerance in rice (Oryza sativa L.) at the germination stage based on genome-wide association study

Response of forage nutrient storages to grazing in alpine grasslands

Genotypic and environmental effect on male flower production in Cupressus sempervirens clones and selection of genotypes with reduced pollen emission

Dpe2/phs1 revealed unique starch metabolism with three distinct phases characterized by different starch granule numbers per chloroplast, allowing insights into the control mechanism of granule number regulation by gene co-regulation and metabolic profiling

The redox status of salinity-stressed Chenopodium quinoa under salicylic acid and sodium nitroprusside treatments

The conserved and high K-to-Na ratio in sunflower pollen: Possible implications for bee health and plant-bee interactions

Field evaluation of TaDREB2B-ectopic expression sugarcane (Saccharum spp. hybrid) for drought tolerance

Green approach for the recovery of secondary metabolites from the roots of Nardostachys Jatamansi (D. Don) DC using microwave radiations: Process optimization and anti-alzheimer evaluation

Response of under-ground bud bank to degradation in an alpine meadows on the Qinghai-Tibet Plateau, China

Separate foliar sodium selenate and zinc oxide application enhances Se but not Zn accumulation in pea (Pisum sativum L.) seeds

Surfactin secreted by Bacillus amyloliquefaciens Ba01 is required to combat Streptomyces scabies causing potato common scab

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Machine learning assisted dynamic phenotypes and genomic variants help understand the ecotype divergence in rapeseed

Content Provider	frontiers
Author	Feng, Hui Guo, Chaocheng Li, Zongyi Gao, Yuan Zhang, Qinghua Geng, Zedong Wang, Jing Chen, Guoxing Liu, Kede Li, Haitao Yang, Wanneng
Abstract	Three ecotypes of rapeseed, including winter, spring and semi-winter, has been formed to enable plant adapting different geographic area. Although several major loci had been found to contribute to the flowering divergence, the genomic footprints and associated dynamic plant architecture in vegetative growth stage underlying the ecotype divergence remains largely unknown in rapeseed. Here, a set of 41 dynamic i-traits and 30 growth-related traits were obtained by high-throughput phenotyping of 171 diverse rapeseed accessions. Large phenotypic variation and high broad-sense heritability were observed for these i-traits across all developmental stages. Of which, 19 i-traits were identified to contribute to the divergence of three ecotypes using random forest model of machine learning approach, and could serve as biomarkers to predict the ecotype. Furthermore, we analyzed genomic variations of the population, QTL information of all dynamic i-traits, and genomic basis of the ecotype differentiation. It was found that 213, 237 and 184 QTLs responsible for the differentiated i-traits overlapped with the signals of ecotype divergence between winter and spring, winter and semi-winter, and spring and semi-winter, respectively. Of which, four common divergent regions between winter and spring/semi-winter and the strongest divergent regions between spring and semi-winter were found to overlap with the dynamic QTLs responsible for the differentiated i-traits at multiple growth stages. Our study provides important insights into the divergence of plant architecture in vegetative growth stage among the three ecotypes, which was contributed by the genetic differentiation, and might contribute to the environment adaption and yield improvement.
ISSN	1664462X
DOI	10.3389/fpls.2022.1028779
Volume Number	13
Journal	Frontiers in Plant Science
Language	English
Publisher Date	2022-11-15
Access Restriction	Open
Subject Keyword	Dynamic phenotyping Rapeseed Machine learning Quantitative Trait Loci Ecotype
Content Type	Text
Resource Type	Article
Subject	Plant Science

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