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| Content Provider | frontiers |
|---|---|
| Author | Liu, Fei Tang, Lindong Li, Qing Chen, Leihui Pan, Yuyue Yin, Zhao He, Jingjun Tian, Junzhang |
| Abstract | The mechanism underlying the association between the development of head and neck squamous cell carcinoma (HNSCC) and ferroptosis is unclear. We analyzed the transcriptomes of 5902 single cells from a single-cell RNA-sequencing (scRNA-seq) dataset. They then aggregate into B cells, epithelial cells, fibroblasts, germ cells, mesenchymal cells, cancer stem cells, stem cells, T cells and endometrial cells, respectively. Our study shows that multiple pathways are significantly enriched in HNSCC development including extracellular matrix structural components, humoral immune responses, and muscle contraction. Differentially expressed genes analysis in Pseudotime analysis, pathway and biological function indicated that there was a significant correlation in the ferroptosis pathway. Furthermore, higher ferroptosis potential index (FPI) scores were significantly associated with worse overall survival prognosis in HNSCC patients. Pseudo-temporal, survival analyses and immunohistochemistry identified multiple central genes in HNSCC development, including ACSL1, SLC39A14, TFRC, and PRNP genes, and indicated associated ferroptosis. Overall, our study detected ferroptosis-related features is closely correlated with HNSCC prognosis and development, and deserved candidates suitable for immunotherapy treatment strategies determination for HNSCC patients. |
| ISSN | 2296889X |
| DOI | 10.3389/fmolb.2022.962742 |
| Volume Number | 9 |
| Journal | Frontiers in Molecular Biosciences |
| Language | English |
| Publisher Date | 2022-08-08 |
| Access Restriction | Open |
| Subject Keyword | Head and neck squamous cell carcinoma Cell heterogeneity Prognostic Single Cell RNA sequencing Ferroptosis |
| Content Type | Text |
| Resource Type | Article |
| Subject | Biochemistry Molecular Biology |
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